Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0060 |
Symbol | |
ID | 4846715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 56275 |
End bp | 57963 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640114731 |
Product | TPR repeat-containing protein |
Protein accession | YP_001045977 |
Protein GI | 126178012 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCC CCTGGAAGAG CGTCGAGGCC TGGTGCAAAA AAGGGCGTGC ATACGCCGAG CAGGGGCAGT ACGACCGGGC CGTCGAGTGC TACGACCAGG CCATCCGCCA GAACACCGGC GCCGGCGACG CCTGGTACCA TAAAGGGCTT GCCCTCGCGG CCGCCCGGCG CCACCGGGAA GCGCTCGAAT GCTTCGACCA GGTGGTCAGG ATCGACCCGA CCTGCGGCCG GTTCTGGCTG GCCCGGGGGC AGACGCTCTA CGACCTCGGG GAGTGCCGGG AGGCGATTGG TTCCTGCGGC CAGGCGGTGA AACTCGCGCC GGACTCCGCG AACGCCTGGT TCATCCGGGG CCACGCCCTC AGAAAGATCG GGCTTTCCCC CGAGGCAATC GAGTGCTACG ACCGGGTGGT CGCGCTCGAA CCGAACCGGA TCGATGCCTG GCTCGCTCGC GGCACGGCGC TTGCCGCCGA ACGCCGATAC GAGGCGGCGA TCGAGTGCTA CGACCGGGTG GTCGCGCTCG AGCCAAAAAA CGCGAACGCC TGGTACGCCA GAGGGACCAT CGAGACCCTC CTCTCCCGCT ACGAGGACGC GATCGCCTCC TACGGCCAGG CCGTCGCCAT CGACCCGAAC CACGCCGAGA CCTGGTACAA CCGGGGATGC GCGCTTTCGG CGCTCAAGCG CTACGACGAG GCAATCGGGT GCTTCGACCG GGCGATCGCC CTCCGCCCCG ACGACGCCGA GACCTGGTAC AACCGGGGCC GCGCACTGCA GAATCTGGAG CGTTACGAAG AGGCGCTCGA CTGCTACGAG CGGGCGTTCC GGATCAACCC CGATTATCCC GGTATCTGGA ATCACAAGGC CACGGTGCTG AAGAAGCTGA AACGCTACGA CCTCTCGCTC GCCTGCTTCG ACCGGGCGCT CCGGGTGAAC GCCGTCGACG CGGAGATCTG GCACCAGAAG GGCCTGCTCT ACTTTACCCT GAAGCGCTAC GGAGATGCGA TAGAGTGCCT CAGTCAGGCG CTCAAACTCC AGCCCGGTCA CACTGACGCA GAATACTACC GGGGCGAGAG TTACTACGCC CTCGGGAACT GCGAGGCCGC GATCGACTGC TACCGGGCCG TGGTCAGGCT GAATCCCGAG AACGCCGTAG CCTGGAACAA CTGCGGCAAC GCACTTTACC ACCTCAAGCA CTACGAGGAG GCACTCGTCT GTTACGAGCG GGCGCTTGAG ATCGACCCGG AGAACCGCCG GGTCTGGAAC AACAAAGCGA GCGTTCTCTC CGTTCTGTCA CATTACGACA AGGCGCTCGT ATGCTACGAC CAGGAACTCC TGGCCCACCC GGAGAACGCG GACGCCTGGT ACAATAAAGG GGTCGCGCTC TTCGTCCTCG GGCGGTACAG CGAGGCCGTC ACCTGCTATG CCCATGTGCT CGAGATCGAT CCCGCGAGAG CCGAGGTCTG GAACACGATG GGGAACGCAC TCGTGATCCT GGAGCGCTCC GAAGAGGCTC TCGAGTGCTA CGACCTGGCG CTCGCCGCGA GCCCCGACGA CATCGAAGCG CTCAACGGGA AGGCGGTGGC CCTCATAAAT CTCGACCGTC CCGCCGAAGC GGCCAAATAC TACGAGAGGC TGCAGCGGCT GCCGGCATGG CAGCGAGAAC GGAATTCGGG AAAAAGGAAG GGGCTTTAA
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Protein sequence | MELPWKSVEA WCKKGRAYAE QGQYDRAVEC YDQAIRQNTG AGDAWYHKGL ALAAARRHRE ALECFDQVVR IDPTCGRFWL ARGQTLYDLG ECREAIGSCG QAVKLAPDSA NAWFIRGHAL RKIGLSPEAI ECYDRVVALE PNRIDAWLAR GTALAAERRY EAAIECYDRV VALEPKNANA WYARGTIETL LSRYEDAIAS YGQAVAIDPN HAETWYNRGC ALSALKRYDE AIGCFDRAIA LRPDDAETWY NRGRALQNLE RYEEALDCYE RAFRINPDYP GIWNHKATVL KKLKRYDLSL ACFDRALRVN AVDAEIWHQK GLLYFTLKRY GDAIECLSQA LKLQPGHTDA EYYRGESYYA LGNCEAAIDC YRAVVRLNPE NAVAWNNCGN ALYHLKHYEE ALVCYERALE IDPENRRVWN NKASVLSVLS HYDKALVCYD QELLAHPENA DAWYNKGVAL FVLGRYSEAV TCYAHVLEID PARAEVWNTM GNALVILERS EEALECYDLA LAASPDDIEA LNGKAVALIN LDRPAEAAKY YERLQRLPAW QRERNSGKRK GL
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