| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0053 |
|---|
| Symbol | |
|---|
| ID | 4848266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 50759 |
|---|
| End bp | 52039 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640114724 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_001045970 |
|---|
| Protein GI | 126178005 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCC TGATCTCCGC GTGCCTGCGC GGGGTTCCCC CCGAGGTGGA GACGATCGCC
CGGGAAGAGG ATCTCCCCCC CCACGCCGCC GCGCGGGCCG TCGCCCGCGG CCGGATAGTC
ATTCCCGCAA ACCCCGCGAG ACCGCACCGG CTCTGCGCCA TCGGGGAGGG CTGCAGGGTG
CGGGTCAACG TGAACGTCGG GACGTCGGGA ACACGGTGCG ACGAGGATCT CGAGGCCGAG
AAGGCGAAGG CGGCCCTCCG GGAGGGGGCG GACGCGCTGA TGGACCTCTC TACCGGCGGC
GATCTCGTCC GCATCCGGCA GAGGATCCTC GAACTCGATG CGCCGGTCGG CACCGTCCCG
GTCTACGAGG CGGTCCGGCG GGCGGGGAGT GCGGCGGACG TCGACGCCGA TCTGTTGTTC
AAGGTGATCC GGGAGCACTG CCGGCAGGGC GTGGACTTCC TGACGCTGCA CTGCGGCGTG
AACCGCGACG CGCTCGCGTC GCTCAAGGCC GACCCCCGGA CGATGGGCGT TGTTTCCCGG
GGCGGGGCGT TCCACGTGGC GATGATGGCC GCGACGGGCG AGGAGAATCC CCTTTACGCG
GAGTACGACT ACCTGCTCGA GATCCTCAGC GAGCACGACG TCGTCGTGAG CCTCGGCGAC
GGGATGCGGC CGGGCGCGCT CGTGGACGCC GGCCGCCTCG CGAAGTCGAC CGAGTACCTG
ACGCTCGGCC ACCTCGCGAA ACGGGCGCTC GCCGCCGGGG TGCAGCGGAT GATCGAGGGG
CCGGGGCATA TCCCGGCCGA CCAGGTCGGC TACAACGTCC GGATGATCAA GGAACTGACC
GACGGCGCTC CGCTCTACCT GCTCGGCCCG CTCGTCACCG ACGTGGCGCC GGGCTACGAC
CACGTCGTGG GGGCGATCGG GGGCGCGATC GCCTGCATGA ACGGCGCCGA CTTCCTCTGC
ATGGTCTCGC CGGCCGAGCA CCTGGCGCTG CCGGACGTCC GCGACATCGT GGAGGGGACG
CGGGTGGCGA AGATCGCGGC GCACGTCGGG AGCCTCTCCC GCGCCGCCGC ACACACGAAG
AACCGCGAGA TCCGGATGGC GGAGGCGCGG CGGGCGCTCG ACTGGGAGAA ACAGTTCGAG
GCGGCGCTCG CTCCCGAGGA GGCGCGGCGT ATCCACGAGC GCGACGGCGA GATCGAGACC
TGCTCGATGT GCGGCGACCT CTGCGCCGTG AAGATGGTGC GGGATATCCT CCCGGTGCCG
GAAGAACGGA TGGAGCCGTG A
|
|---|
| Protein sequence | MHTLISACLR GVPPEVETIA REEDLPPHAA ARAVARGRIV IPANPARPHR LCAIGEGCRV
RVNVNVGTSG TRCDEDLEAE KAKAALREGA DALMDLSTGG DLVRIRQRIL ELDAPVGTVP
VYEAVRRAGS AADVDADLLF KVIREHCRQG VDFLTLHCGV NRDALASLKA DPRTMGVVSR
GGAFHVAMMA ATGEENPLYA EYDYLLEILS EHDVVVSLGD GMRPGALVDA GRLAKSTEYL
TLGHLAKRAL AAGVQRMIEG PGHIPADQVG YNVRMIKELT DGAPLYLLGP LVTDVAPGYD
HVVGAIGGAI ACMNGADFLC MVSPAEHLAL PDVRDIVEGT RVAKIAAHVG SLSRAAAHTK
NREIRMAEAR RALDWEKQFE AALAPEEARR IHERDGEIET CSMCGDLCAV KMVRDILPVP
EERMEP
|
|---|
| |