Gene Rsph17029_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3881 
Symbol 
ID4898511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1013427 
End bp1014425 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID640114485 
Producthypothetical protein 
Protein accessionYP_001045732 
Protein GI126464619 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.186688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTC TCGCCCTCGC CTCGCCCGTG ACGCTCCTCG TGCCGGGCCT TCTGTGCGCC 
GTCACGGTCG CGCTCGCCGC GACCTTCCTG TCGGAGCATT ACGGCATCCC GGTGATGCTG
ATGGCGCTTC TGCTCGGGAT GGCGCTGAAC TTCCTGAGCG AGCCGGGCAG CCGCTGCCTT
CCCGGCATCG AATTCGCCTC GAAGAAGCTC CTGCGCTTCG GGGTGGCGCT CCTGGGCCTC
GGGATCACCG TGCAGCAGGT CATGGCTTCG GGCCCCGAGG TGCTGGCCAT TGCCGTCTCG
GGCGTGGCGG TGACGATCGG CTCGGGCCTG CTGCTCGCGC GCCTTCTGGG CCTGCCGATG
CAGATGGGCA TTCTTGCCGG CGGCGCGGTG GGCATCTGCG GCGCGTCGGC GGCGCTCGCG
ATCTCCTCCG TCCTGCCCCG CCGCGAGGGG ACGGAGCGCG CGACCGTCTT CACCGTGATC
GGCGTGACCG CCCTGAGCAC GGTCGCGATG ATCCTCTATC CGATCCTGAC CGAGCGGCTC
GGGCTGGGCG ACGTCGCGAC GGGCGTCTTC TTCGGCGCCA CGATCCACGA TGTGGCGCAG
GTGGTGGGCG CGGGCTATTC CGTCTCGCAG GAGGCGGGCG ACACCGCCGT CTTCGTCAAG
CTCTTGCGGG TGGCCCTGCT GATCCCGATC GTGACCGGCC TCTCGCTCGT CATGGGCACG
GGCCGCGGCG GCGAGGGCGG CGCCCTTCCC ATTCCGCTCT TCGTGCTGGG CTTCGCGGCG
CTCGTCGTGC TGGGCTCGGC CGGTCTCGTG CCCGAGGAGG TGAAGGTCGC GCTCCTCTCC
TTCTCGCGCT GGTGCCTCGT GGTGGCCATC GCCGCGCTCG GCACCAAGAC CTCGCTCGGA
CGCCTCGCGG CGGTGGGCGG GCGGCCGATC CTGCTCATCT GCACGCTCAC GCTTCTGCTC
GCGCTCTATG CGCTCGGGCT CATCGGCCTT CTGTTCTGA
 
Protein sequence
MTVLALASPV TLLVPGLLCA VTVALAATFL SEHYGIPVML MALLLGMALN FLSEPGSRCL 
PGIEFASKKL LRFGVALLGL GITVQQVMAS GPEVLAIAVS GVAVTIGSGL LLARLLGLPM
QMGILAGGAV GICGASAALA ISSVLPRREG TERATVFTVI GVTALSTVAM ILYPILTERL
GLGDVATGVF FGATIHDVAQ VVGAGYSVSQ EAGDTAVFVK LLRVALLIPI VTGLSLVMGT
GRGGEGGALP IPLFVLGFAA LVVLGSAGLV PEEVKVALLS FSRWCLVVAI AALGTKTSLG
RLAAVGGRPI LLICTLTLLL ALYALGLIGL LF