Gene Rsph17029_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3793 
Symbol 
ID4899005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp920092 
End bp921225 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content74% 
IMG OID640114397 
Productmajor facilitator transporter 
Protein accessionYP_001045645 
Protein GI126464532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.510326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.658705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTT CCGCCGATAC GCCCGCCACC CGCCTTGCCA CCCGGCTGGC CTTCTTCGCG 
GCGGGCTTCG CCATGTCCTG CTGGGCGCCG CTCGTCCCCT TCGCCAAGGC GCGCACCGGC
GTCGACGAGG CCGAGCTGGG GCTGCTCCTC CTCTGCCTCG GGATCGGCTC GCTGGTGGCC
ATGCCCGTGA CCGGCTGGAT CAGTGCGCGG ACGGGCTCGC GCCCGATGAT CCTGCTGGGC
GGCGCGGGGA TGGTGCTCTG CCTGCCGCTC CTTGCCGCCT CGGGCGAGGC CTGGCTGCTG
GCGCTGGCGC TCCTTCTGTT CGGCGCCTCG CTCGGCACCC TCGACGTGGC GATGAACGTT
CATGCGGTCG CGGTCGAGCG CGCCTCGGAC CGGCCGCTGA TGTCGGGCTT TCACGCGCTC
TTCAGCGTGG GCGGCTTCGC GGGCGCGGGG CTGATGACGC TTCTCCTCTG GCAGGGCCTG
TCACCCTTCG CGGCCTCGCT GGTGGGCAGC GCCGTGGCGC TCGCCGCGCT GCTGGCCGCC
GGGCCCCGGC TCCTGCGCGC GCAGGGGGGC GAGCCGCCGA AGCTCGCGGT GCCGCGGGCG
GCGGTGCTCC TGCTCGCGGG CCTCGCCGCC GTGACCTTCC TCGTCGAGGG GGCGCTGCTC
GACTGGGGCG CGCTTCTCCT CGTCGGGCGC GCGCTGGTCG AGCCCGCGCA GGGCGGCCTC
GGCTACATGC TCTTCTCGGT CGCCATGACC GTGGGGCGGC TCACCGGCGA CCGGATCGTG
ATGGCGCTCG GCGACCGGCG GGTGCTCTTC TCCGGCGGGC TCCTGACGCT CGCGGGCTTT
GCGCTGCTTC TTCTGTCCGA CTGGCGGCCG GGCGCGCTCG CGGGCTTCGT GCTGATCGGC
TGCGGCGCCT CGAACATCGT GCCGGTCCTC TTCAGCCTCG CCGGGCGCCA GACGGTCATG
CCGCCCGCGC TGGCCATCGC GGCGGTCACG ACCACGGGCT ATGCGGGCAT CCTCGCCGGC
CCGGCGCTCA TGGGCTTCGT CTCGCACGCG ACGAGCCTGC CGCTTGCCTT CTGGATGCTC
GCGCTCCTGA TGGCGCTGGT GCCCGCCACG GCGCGCATCG TGGCGAGGAA CTGA
 
Protein sequence
MPPSADTPAT RLATRLAFFA AGFAMSCWAP LVPFAKARTG VDEAELGLLL LCLGIGSLVA 
MPVTGWISAR TGSRPMILLG GAGMVLCLPL LAASGEAWLL ALALLLFGAS LGTLDVAMNV
HAVAVERASD RPLMSGFHAL FSVGGFAGAG LMTLLLWQGL SPFAASLVGS AVALAALLAA
GPRLLRAQGG EPPKLAVPRA AVLLLAGLAA VTFLVEGALL DWGALLLVGR ALVEPAQGGL
GYMLFSVAMT VGRLTGDRIV MALGDRRVLF SGGLLTLAGF ALLLLSDWRP GALAGFVLIG
CGASNIVPVL FSLAGRQTVM PPALAIAAVT TTGYAGILAG PALMGFVSHA TSLPLAFWML
ALLMALVPAT ARIVARN