| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3634 |
|---|
| Symbol | |
|---|
| ID | 4898144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 732049 |
|---|
| End bp | 733731 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640114242 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001045496 |
|---|
| Protein GI | 126464383 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0288288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.52603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCGG GCGCGCGGCT TCTGGTCGAC CGGCGGGACG ACGGAGCACT GCGGCTGACG
ACGGATCTGA CGCTGCTCGG CGCCGAGACC GACATCGCCT GCAAGCTGCG CCACTGGGCG
CGGGTCGCGC CGGACCGGAT GCTGATGACC GCGCCCGACG CGGCCGGAGG GCGGAGCGGC
ATCTCCTACG GCGAGGCGCT TTCCGAGGCG CGGCGGCTGC ACGGGCAGCT CGCGGCGCGC
GGCCTGCGGC CGGGCGAGCG AGTGGCGAGC CTGTTGCCCG CGGGCCTCGA TGCGCTGCGC
CTGCGGCTCG CCTGCCTGCT GGGCGGCTTC GTCCATATCA CCCTGCCCCC GCATCCGTTC
CGGGCCGTGA CGCAGTTCCC CCCCGAGGCG CCGGAGGCCG CGCGTCTGTG GCGGGTGGCC
GCTCCGGATC TCGTGGTGCT GCCGGCAGGA CGCGTCACCG GCGGACCGGC ACTCGCCCTG
ACGGACCTGC CCGAGGCGCC CGCGGCCCCC GACCATCCGG GTGCCCCGCA GGACTGGACG
GCGGTCTTCT TCACCTCGGG CAGCACGGGC GCGGCCAAGG GCGTGCCGAT CACCCGGGGA
ATGATCTCCT CCTGTCAGGC GGCCTATGCC GTGGCCTGGC CCTTCCTTGC GGAAGAACCG
CCGGTCCTGA TCGACTGGAT GCCCTGGAAC CATGTGTTCG GCGGCCTCGA CAATCTGTTC
AAGATCGTCT GGAACGGCGG CAGCCTCCAT CTTGCGCCGC CGCCCTCGGC CGAGGGCATG
GGCGCGATGC TGGGTCTGAT GGCCGAGGTG CGGCCCAGCC TGTCGATCGG CGTGCCTTTG
GGGCTGAAGC TCCTGATGGA TGCCTGGGAC GGCCAGCCCG ACCGGGTGGC GGAGGGCTGT
GCCGCGCTGC GCCATATCTT CTTCGCCGGG GCCGCGATGG ATCCCGCACT CTGGGACCGG
CTCGCGGGCT TCCGCGACGC GTTGGCCCAC CGCCACGGCC ACCGGATCGC GGTTCTGTCG
GGCTATGGGG CCACCGAGGC GGGATCGACC ATGTGCCTCG TGCCGGGTGA CATCGCCGCG
CCCGGGGTGC TCGGCTGGCC GCTGCCGGGG CACGAGGTGG CACTGGTCGA GACCGAGGGC
CTGTCGGAGA TCCGGTTCCG AGGCCCCAAT CTCGCGCCCT GCTATCTCGG CGAGGAGGGG
TCCTTTCCGC TGCCTCTGGA TGCCAAGGGC TATTACCGCA CCGGCGACGC GGGCCTTCTG
GCCCCCGATG CTACGGGCCA GCCGATGCTG CGCTTCGACG GACGGCTGGC CGAGGATTTC
AAGCTCTCGA GCGGGATCAA GGTGCGGGCG GGCCTCCTGC GCGGCCAGAT CCTCGGCCGG
CTCGGGCCGC TCGCCTCGGA TCTCGTGCTG GGGGGCGCGG GCGGCGACGG GCTGGTGGCG
CTGATCCTCG CGGCGCCGGG GGCGGAGGTC CGGGCCATCG CCGCGGCGCT GGACGGGTGG
AACCGGGACA ATCCCGGCAG CTCCACCGCC ATCCGCCGCT TCGCGCTCGC CGATTTCACG
CCCTCGGCGG AAGAGGGCGA GGTTTCGGCC AAGGGCCAGC TGGTGGCCTC GCGCCTGCAT
CGCACCCGGG CCGGCCTCTT TGCCGATCTG ATGGCGGACC GGATCGGCGA GGTGCCCCGC
TGA
|
|---|
| Protein sequence | MAPGARLLVD RRDDGALRLT TDLTLLGAET DIACKLRHWA RVAPDRMLMT APDAAGGRSG
ISYGEALSEA RRLHGQLAAR GLRPGERVAS LLPAGLDALR LRLACLLGGF VHITLPPHPF
RAVTQFPPEA PEAARLWRVA APDLVVLPAG RVTGGPALAL TDLPEAPAAP DHPGAPQDWT
AVFFTSGSTG AAKGVPITRG MISSCQAAYA VAWPFLAEEP PVLIDWMPWN HVFGGLDNLF
KIVWNGGSLH LAPPPSAEGM GAMLGLMAEV RPSLSIGVPL GLKLLMDAWD GQPDRVAEGC
AALRHIFFAG AAMDPALWDR LAGFRDALAH RHGHRIAVLS GYGATEAGST MCLVPGDIAA
PGVLGWPLPG HEVALVETEG LSEIRFRGPN LAPCYLGEEG SFPLPLDAKG YYRTGDAGLL
APDATGQPML RFDGRLAEDF KLSSGIKVRA GLLRGQILGR LGPLASDLVL GGAGGDGLVA
LILAAPGAEV RAIAAALDGW NRDNPGSSTA IRRFALADFT PSAEEGEVSA KGQLVASRLH
RTRAGLFADL MADRIGEVPR
|
|---|
| |