Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3572 |
Symbol | |
ID | 4898362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 662670 |
End bp | 663161 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640114181 |
Product | hypothetical protein |
Protein accession | YP_001045435 |
Protein GI | 126464322 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.163728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGC TCGCCCATGT CATCGGCGCC GGCTGGCTGG CGATCTCCGT CGGCTTCATT CTGGTCACCG TCGTCACGGT GATCTGCCAG GTCGCCTTCC GCTACCTGCT GGCCCTGCCG CTGGCATGGA CCGAGGAAGT CTCGCGGATG GCCCTCGTGG GGGCCGTCTA TGCGGGTCTG CCGGCCGCCT ATCTCAGGGG CGAGCATATC GTGGTCGACT TCTTCGTGTC GCTGCTGCCC GGCTGGCTCT TCCAGCCCTA CGTCATCGCG ATGAAACTGA TCTGCGCGGT GACGCTGAGC TATCTCACCT ACGGCGCCTT CCTGCAGATC GACGGCACGC GGGGGATGAC GCTGATCGCT CTGCCGACCT TCCCTGTTTC CGCAATCTAT GCCGTGCAGG CGGCGGCGCT CTTCTCCTTC ACCCTGCTGA TCCTGCTCAC GCTGCGGGAT CCGCGGACCT ACGTCGCGCA AGAAGCGGGG CTCGATTCCT GA
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Protein sequence | MRKLAHVIGA GWLAISVGFI LVTVVTVICQ VAFRYLLALP LAWTEEVSRM ALVGAVYAGL PAAYLRGEHI VVDFFVSLLP GWLFQPYVIA MKLICAVTLS YLTYGAFLQI DGTRGMTLIA LPTFPVSAIY AVQAAALFSF TLLILLTLRD PRTYVAQEAG LDS
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