Gene Rsph17029_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3572 
Symbol 
ID4898362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp662670 
End bp663161 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID640114181 
Producthypothetical protein 
Protein accessionYP_001045435 
Protein GI126464322 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.163728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGC TCGCCCATGT CATCGGCGCC GGCTGGCTGG CGATCTCCGT CGGCTTCATT 
CTGGTCACCG TCGTCACGGT GATCTGCCAG GTCGCCTTCC GCTACCTGCT GGCCCTGCCG
CTGGCATGGA CCGAGGAAGT CTCGCGGATG GCCCTCGTGG GGGCCGTCTA TGCGGGTCTG
CCGGCCGCCT ATCTCAGGGG CGAGCATATC GTGGTCGACT TCTTCGTGTC GCTGCTGCCC
GGCTGGCTCT TCCAGCCCTA CGTCATCGCG ATGAAACTGA TCTGCGCGGT GACGCTGAGC
TATCTCACCT ACGGCGCCTT CCTGCAGATC GACGGCACGC GGGGGATGAC GCTGATCGCT
CTGCCGACCT TCCCTGTTTC CGCAATCTAT GCCGTGCAGG CGGCGGCGCT CTTCTCCTTC
ACCCTGCTGA TCCTGCTCAC GCTGCGGGAT CCGCGGACCT ACGTCGCGCA AGAAGCGGGG
CTCGATTCCT GA
 
Protein sequence
MRKLAHVIGA GWLAISVGFI LVTVVTVICQ VAFRYLLALP LAWTEEVSRM ALVGAVYAGL 
PAAYLRGEHI VVDFFVSLLP GWLFQPYVIA MKLICAVTLS YLTYGAFLQI DGTRGMTLIA
LPTFPVSAIY AVQAAALFSF TLLILLTLRD PRTYVAQEAG LDS