| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3399 |
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| Symbol | |
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| ID | 4898290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 453127 |
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| End bp | 454407 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640113996 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001045264 |
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| Protein GI | 126464151 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.564421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG GGCTCTTTCT CGGAACCCTG ATCGCGATGA TCGGCATCGG CGCCCCCATC
GCCTATGCCC TGATCGTGAC CGGCGCGGCG CTGATGTGGC AGATGGGGCT CTTCGACGGG
CAGATCATCG CGCAGAACCT GCTGAACGCG GTCGACAGTT TCCCGATGGT GGCGATCCCG
CTCTTCATCC TCGCCGGAGA GGTGATGAAC GCAGGCGGCC TGTCGCGCCG CATCGTCGAT
CTGGCGCGGG CGCTCGTCGG CCACCACCGC GGCGGCCTCG GCTATGTGAC CATCTTCGCG
GGCGTCCTGC TTTCGAGCCT TTCGGGCTCG GCCCTTGCGG ATGCGGCCTC GCTCTCGGCG
CTGCTGCTGC CGATGATGGT GGCCGCGGGC CATGCGCGCG AACGCTCGGG CGGTCTCATC
GCGGCCTCGG CGATCATCGG CCCGATCATC CCGCCGAGCA TCGGCTTCAT CGTCTTCGGC
GTGGCCACGA ACCTCTCGAT CAGCAAGCTC TTCATGGCGG GCATCGCGCC GGGCCTGATG
ATCGGGCTCG CGCTCTGCAT CGCGTGGTTC TTCGTCTCGC GCCGCGACGA TGTGGCGACC
GCACCCAAGG TCGGTGCGCG CGAGCGGCTG CGGGCCTTCG GCCGCAGCCT CTGGGCGCTG
ATGCTGCCGG TGATCATCAT CGTCGGGCTG CGCTTCGGCA TCGTGACCCC GACCGAGGCC
GCCGCCGTCG CCGCCGTCTA CGCGCTCTTC GTGGCGCTGG TGGTCTACCG CGAGCTGAGC
TGGCGCGACC TGCCGGACCT CGTGCTCGAC GCAGGCAAGA CCGCGGCGGG CGTGATGTTC
CTCGTGGCGG CGGCCGCGAT CCCGGCCTGG ATGATCTCGG TGGCCGACAT TCCGGGCCAG
CTCGTCGACC TGATCGAGCC GCTGATGGGC AACCAGACGC TGCTGATCGT GGTGCTGATG
CTGCTGATCC TGATGGTGGG GACGGCGATG GATCTCACGC CGACGATCCT CCTGCTCGGC
CCCATTCTGG TGCCGGTGGT GATCGAGGCA GGCATCGATC CGATCTATTT CGGCGTGCTC
TTCATGATCA ACTGCTCGAT CGGCCTCATC ACGCCGCCGG TCGGCACGGT GCTGAACGTG
GTCTGCGCCG TGGGCCGTCT CGATTACGAG ACGCTGGTGC GCGGAACGCT GCCCTTCCTC
CTCGCGCAGG TGGCCGTGCT GTTCCTCCTG ATCCTCTTCC CCGCCCTCGT GACCCAGCCG
CTGCAGTGGT TGCTGCACTG A
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| Protein sequence | MTIGLFLGTL IAMIGIGAPI AYALIVTGAA LMWQMGLFDG QIIAQNLLNA VDSFPMVAIP
LFILAGEVMN AGGLSRRIVD LARALVGHHR GGLGYVTIFA GVLLSSLSGS ALADAASLSA
LLLPMMVAAG HARERSGGLI AASAIIGPII PPSIGFIVFG VATNLSISKL FMAGIAPGLM
IGLALCIAWF FVSRRDDVAT APKVGARERL RAFGRSLWAL MLPVIIIVGL RFGIVTPTEA
AAVAAVYALF VALVVYRELS WRDLPDLVLD AGKTAAGVMF LVAAAAIPAW MISVADIPGQ
LVDLIEPLMG NQTLLIVVLM LLILMVGTAM DLTPTILLLG PILVPVVIEA GIDPIYFGVL
FMINCSIGLI TPPVGTVLNV VCAVGRLDYE TLVRGTLPFL LAQVAVLFLL ILFPALVTQP
LQWLLH
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