Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3147 |
Symbol | |
ID | 4898610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 169946 |
End bp | 170929 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640113749 |
Product | inner-membrane translocator |
Protein accession | YP_001045019 |
Protein GI | 126463906 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.696622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.299191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCC ATCTGATGCG CTGGGAGGTG CTGCTCCTCC TGATCCTGCT GGCCGAGCTT GCCATCTTCG GCATGATCAA CCCGCGCTTC CTCAGACCCT CGTCGCTCCT GTTCGGCACA TCGGATTTCG TGCAGGTGGG GATCGTGGCG GTGCCGCTGA CGCTCGTCAT CATCGCAGGC GGCATCGACG TGAGCTTCGC CTCGACCGTG GGCCTCGCGG CCATCGCCTT CGGCATCGCC AACTTCTTCG GCCTTCCGCT GCCCCTGTCT CTGGCCGTGG GCCTGGCCAC CGGCGCCGCG GCGGGGTTGC TCAATGCGAC GATCATCCGG CTCACCCGGC TGCAGCCGCT CGTGGTGACG CTGGGCTCGC TCTACATGTT CTCGGGAGCG GCGACGGTCC TGTCGGGCGT CGTGGGCGCC AGCGGCTACG AGGGGATCGG CGGCTTTCCC GAGGCCTTCA CCGCGCTCGG CTATGCGCAG GTGCTGGGCC TGCCGATGCC GCTCGTCGTC TTCCTCGTCT TCGCGGCGGT GCTTCTGGTG CTCCTGCACC TGACCCGGTT CGGCCGGCTC GTGTTCCAGA TCGGCCAGAA TGCCGAGGCC GCGCGCCATT CCGGGATGCC CGTCTTCCGC GTGCAGCTCG TGACCTATGT CCTGACCGGC CTTGCCGCCG CCCTCGCGGG GCTGATGCTC TCGGCCTATT TCGGCTCGGC CCGCGTCGAT CTCGGCAGCG CCACGCTGCT GCCCGCGATC ACGGCGGCTG TCCTCGGCGG GGCCTCGATC TACGGCGGGC AGGGCTCCGT CCTCGGCACG ATCATCGCCA CCTTCATCAT CGGCTACCTC CAGCAGGGCC TGCAGATGAG CGGCGTGCCG AGCCAGATTT CCAGCGCGCT GTCCGGGGCG CTGCTGGTCC TCGTCGTCGC CCTGCGCCAC GGCGCCGAGC TGCTGCGGGA CTTCATACCG GTGCGGCTGC GGCGGGCCGA CTGA
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Protein sequence | MNRHLMRWEV LLLLILLAEL AIFGMINPRF LRPSSLLFGT SDFVQVGIVA VPLTLVIIAG GIDVSFASTV GLAAIAFGIA NFFGLPLPLS LAVGLATGAA AGLLNATIIR LTRLQPLVVT LGSLYMFSGA ATVLSGVVGA SGYEGIGGFP EAFTALGYAQ VLGLPMPLVV FLVFAAVLLV LLHLTRFGRL VFQIGQNAEA ARHSGMPVFR VQLVTYVLTG LAAALAGLML SAYFGSARVD LGSATLLPAI TAAVLGGASI YGGQGSVLGT IIATFIIGYL QQGLQMSGVP SQISSALSGA LLVLVVALRH GAELLRDFIP VRLRRAD
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