| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3109 |
|---|
| Symbol | |
|---|
| ID | 4898532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 123087 |
|---|
| End bp | 124016 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640113711 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001044981 |
|---|
| Protein GI | 126463868 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.1017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.129161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGCG GGCGGACGGC GCCCGAGATC TCGCTGCGGC TCCTCGAGAT CTTCGCGGCC
ATGATGCGCG CGGGCACCAC GGTCGAGGCG GCCGAGATGC TGGGCGTGTC GCAGCCCGCC
GTCTCGGCCG GCCTCAAGCA GCTCGAGACC CAGCTCGGCA TCGTGCTCTT CGAGCGCGCC
TCGCGCCGCA TGATGCCCAC GGCCGAGGCG CGCGAGCTGT TCGCCGAGAT CCGGCCGATG
TTCTCGATGC TGCGCAGCTT CACCCAGACC GCCCGCGACA TCCGCGAGGG GTTGAGCGGG
CGGCTGCGGA TCATCAGCAC CCCGCCCATC GGCCACACCC TCGCCCCCCG CGCGCTGGTC
GAGTTCCTGC GCGAGCGTCC CGGCGTCTCG GTGGCCTTCG ACGTGCGCCG CCTCGAACAT
GTGATCGACG CCGTGCAGAG CGGCAGTGCC GATCTGGGCC TCGCGCTCAG CATGGAGCGC
TACACGGCGC TCAATTCCGA GGTGCTGCAC GAGACGCATA TGGTGGCGCT CGTGGATGCG
GCGGGGCCGC TTGCCGCGCA GACCCAGGTC ACGGCCGAAG ACCTTGCCGC GCATCCCTTC
GTGGGGATCG AGGGCGACTC GAAGCTCGGC GGCCTCGTCC GCTCGGCCTT CCTGCAGAGC
GGCCTGGGCT ACCTGCCCCA GATCGAGGTC CGCTATGTCT CGACCGCGGC CGAGCTTGTG
AACCACGGGC TCGGCAATGC GGTGGTCGAT CCCTTCACCG CCCATTATCA TGCCCGGCCC
GGCATCGCGA TCCGGCCCTT CGTGCCCGCC TGCATGACCC GCGTCGTGCT GCTCACCCGC
CGCGGCGTGC CGCGCAGCCA GCTCGCCCAT GCCTTCGCCG CGACGCTGAA ACCGATTTTC
GCCGAACCGC TCCGGAGAAT TCACGCATGA
|
|---|
| Protein sequence | MIGGRTAPEI SLRLLEIFAA MMRAGTTVEA AEMLGVSQPA VSAGLKQLET QLGIVLFERA
SRRMMPTAEA RELFAEIRPM FSMLRSFTQT ARDIREGLSG RLRIISTPPI GHTLAPRALV
EFLRERPGVS VAFDVRRLEH VIDAVQSGSA DLGLALSMER YTALNSEVLH ETHMVALVDA
AGPLAAQTQV TAEDLAAHPF VGIEGDSKLG GLVRSAFLQS GLGYLPQIEV RYVSTAAELV
NHGLGNAVVD PFTAHYHARP GIAIRPFVPA CMTRVVLLTR RGVPRSQLAH AFAATLKPIF
AEPLRRIHA
|
|---|
| |