| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3082 |
|---|
| Symbol | |
|---|
| ID | 4898177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 97473 |
|---|
| End bp | 98693 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640113684 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_001044954 |
|---|
| Protein GI | 126463841 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.180666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.410031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCG AGGCGAAATT CAAGAAACTC GGCACCGACA ACGCCCCCGG GCAGGAGGTG
CGCCAGTCGG CGGCGGGTCT CGAGGCGCTG ATGCGCGGGG CCCCGATCGA GGGCCGGCCG
GTGGATTTCT CGCATGGCGA CGTGGATGCG CACGAGCCGA CGCCGGGCGC CTTCGACCTC
TTCTCGGCAG GCGTGCAGTC GGGGGGCGTG CAGGCTTACA CAGAATATCG CGGCGATCTG
GGCATCCGCG ACCTGCTGGC CCCGCGGCTC GCGGCCTTCA CTGGCGCGCC CGTGGATGCG
CGCGACGGGC TCATCATCAC GCCCGGCACG CAGGGGGCGC TTTTTCTTGC GGTGGCGGCC
ACGGTCGCGC GCGGCGACAA GGTGGCCATC GTCCAGCCCG ACTATTTCGC CAACCGCAAG
CTCGTCGAAT TCTTCGAGGG CGAGATGGTG CCGGTGCAGC TCGATTACGT CTCGGCCGAC
GAGACGCGGG CGGGCCTCGA TCTGACGGGG CTCGAGGAAG CCTTCAAGGC CGGCGCCCGG
GTCTTCCTCT TCTCGAACCC GAACAACCCC GCGGGCGTGG TCTATTCGGC CGAGGAGATC
GGCCAGATCG CGGCGCTGGC CGCGCGCTAC GGCGCGACCG TAATCGCCGA CCAGCTCTAT
TCCCGGCTGC GCTATGCGGG GGCGAGCTAC ACCCACCTGC GCGCCGAAGC GGCGGTGGAT
GCCGAAAATG TCGTCACCAT CATGGGCCCG TCGAAGACGG AGTCGCTTTC GGGCTACCGG
CTGGGCGTGG CCTTCGGCTC CAAGGCCATC ATCGCGCGGA TGGAGAAGCT GCAGGCCATC
GTGAGCCTGC GCGCCGCGGG CTACAGCCAG GCGGTGCTGC GCGGCTGGTT CGACGAGGCG
CCGGGCTGGA TGGAGGACCG CATCGCCCGG CATCAGGCGA TCCGCGACGA GCTTCTGCGC
GTGCTGCGCG GCTGCGAGGG CGTCTTCGCC CGCACGCCTC AGGCCGGCAG CTACCTCTTC
CCGCGGCTGC CGAAGCTCGC TGTCGCGCCG GCCGAGTTCG TCAAGATCCT GCGGCTGCAG
GCGGGCGTCG TGGTGACGCC CGGCACCGAG TTCAGCCCGC ACACGGCGGA CAGCGTGCGG
CTGAACTTCA GCCAGGATCA CGAGGCCGCC GTCGCCGCCG CCCGGCGGAT CGTGGCGCTG
GTCGAGCGGT ATCGCGCATG A
|
|---|
| Protein sequence | MSIEAKFKKL GTDNAPGQEV RQSAAGLEAL MRGAPIEGRP VDFSHGDVDA HEPTPGAFDL
FSAGVQSGGV QAYTEYRGDL GIRDLLAPRL AAFTGAPVDA RDGLIITPGT QGALFLAVAA
TVARGDKVAI VQPDYFANRK LVEFFEGEMV PVQLDYVSAD ETRAGLDLTG LEEAFKAGAR
VFLFSNPNNP AGVVYSAEEI GQIAALAARY GATVIADQLY SRLRYAGASY THLRAEAAVD
AENVVTIMGP SKTESLSGYR LGVAFGSKAI IARMEKLQAI VSLRAAGYSQ AVLRGWFDEA
PGWMEDRIAR HQAIRDELLR VLRGCEGVFA RTPQAGSYLF PRLPKLAVAP AEFVKILRLQ
AGVVVTPGTE FSPHTADSVR LNFSQDHEAA VAAARRIVAL VERYRA
|
|---|
| |