| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2972 |
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| Symbol | fliF |
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| ID | 4895795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 3131891 |
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| End bp | 3133519 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640113575 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001044846 |
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| Protein GI | 126463732 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.593112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGTC GGGCAAGGCA GAAGCCCGTG TCGGAGACCG AAGTGCAGAA CCTCATCTCA
ATCTGGAACG ATCTCGACGG ACGCCGCAGG GCCGTCGTCG TGAGCGCGAC GGTTGCCATG
TTCCTGGCCG TGCTCGGTCT GTCGCAGTTC GCCGGCCGGC CGCCGATGGC GCTGCTCTAT
GCCGGTCTGC AGGGACCGGC GGCGGGCGAA GTCGTGACCG CGCTCGAGGC GCAGGGCGCG
GCCTACGAGG TGAGGGGCGA TTCGGTCTAT GTCGAGGCGG CCCGCCGGGA CGAGATCCGC
ATGAAACTCG CGGGCGAGGG GCTGCCCGCC ACGGGCGCCG CGGGTTACGA ACTCCTCGAC
GGACTCTCGG GCTTCGGCAC CACGTCGCAG ATGTTCGACG CGGCCTATCT GCGCGCGAAG
GAGGGCGAGC TTGCCCGGAC GATCCTCGCC AGCCCGAAGG TCAAGGCGGC ACGGGTGCAT
ATCGCGCAGC CGGCGGCCCA GCCGTTCCGG CGGGAGCAGC GGCCGACGGC GAGCGTCACC
GTGACCACAT CGGGCGGCGC GGTGACCGCG GATCAGGCGC GGGCCTTCAA ACATCTGGTG
GCGTCGGCCG TGGCCGGCCT GCAGCCCGAG GACGTGTCGG TGATCGACAG CGTGATGGGC
CTGATCCGGT CCGGGGACGA GAAGGACAGC GCCACCGCCG CGGGCGAGAG CCGCGCCGCC
GAACTCCGGA GCAACGTCGA GCGGCTGCTC GAGGCGCGGG TCGGGCCGGG CCGGGCTGTG
GTCGAAGTCA GCGTCGATGT CGAGACCGCG CGCGAGTCGA TCGTGGAGAA GAGCTTCGAC
CCCAAGGGCC GCGTGCCGAT CTCGTCGGAA ACCCAGGAGA AATCCAGCAA CTCGACCGAA
CCCTCGCCCG ACGTGACGGT GGCGTCGAAC CTGCCGGAAG GCGACGCGAA GGGAGGCACG
GGCGGCAAGT CGAGCACCAG CGAAACACGC GAGACGGTCA ATTTCGAAGT CTCCCAGACA
CAGCGCGAAC TCATGCGCCA ACCGGGCGCC ATCCGGCGGC TTACGGTGGC GGTTCTGGTG
GACGGGATCA AGACCGTCGC GGACGATGGC ACTGTCGGGT GGGAGCCGCG CCCCGAGGAG
GAGCTTGCCG TCCTGCGTGA ACTGGTGAGT TCGGCCGTGG GGCTCGATGA ATCGCGTGGC
GACAGGCTGA CCTTGCGCTC GCTGGCCTTC GAGACGCCGC CCGAAGCGGG AACCCTGGCC
GAGACCGGCT TCCTCAGCCG CCTCGGCGCC TTCGACCTGA TGAGCCTGAT CCAGATCGGC
GTGCTCGCTC TGGTGGCCCT GATCCTCGGT CTCTTCGTCG TCCGCCCGGT CCTGACGGCG
CCGCCGCGCC CGCCGGCTGC CCCGCAGCCC CTGGCGCTCC CGGGTTACGA GGGCGGCGAA
CCGGCGCTGA CGGGCGAGAT CGACGATAGC GGCGACCTGC CGGACTTCCC GATGGTGTCG
TCCGCGCCTC TCGACCTCGA CGAGGAGGCG GATCCGGTCG CGCGGCTCCG CCGTCTGATC
GAGGAGCGCC AGGCCGAGTC TGTCGAGATC CTGCGCGGCT GGATGGAACC GCAGCGGGAG
GCGCCGTGA
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| Protein sequence | MDGRARQKPV SETEVQNLIS IWNDLDGRRR AVVVSATVAM FLAVLGLSQF AGRPPMALLY
AGLQGPAAGE VVTALEAQGA AYEVRGDSVY VEAARRDEIR MKLAGEGLPA TGAAGYELLD
GLSGFGTTSQ MFDAAYLRAK EGELARTILA SPKVKAARVH IAQPAAQPFR REQRPTASVT
VTTSGGAVTA DQARAFKHLV ASAVAGLQPE DVSVIDSVMG LIRSGDEKDS ATAAGESRAA
ELRSNVERLL EARVGPGRAV VEVSVDVETA RESIVEKSFD PKGRVPISSE TQEKSSNSTE
PSPDVTVASN LPEGDAKGGT GGKSSTSETR ETVNFEVSQT QRELMRQPGA IRRLTVAVLV
DGIKTVADDG TVGWEPRPEE ELAVLRELVS SAVGLDESRG DRLTLRSLAF ETPPEAGTLA
ETGFLSRLGA FDLMSLIQIG VLALVALILG LFVVRPVLTA PPRPPAAPQP LALPGYEGGE
PALTGEIDDS GDLPDFPMVS SAPLDLDEEA DPVARLRRLI EERQAESVEI LRGWMEPQRE
AP
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