| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2595 |
|---|
| Symbol | |
|---|
| ID | 4896899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2733606 |
|---|
| End bp | 2734442 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640113194 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_001044469 |
|---|
| Protein GI | 126463355 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGG GCGCTTCCTC CGGCCTCGGC TTCATGAAGA TGCATGGGGC GGGCAATGAT
TTCGTGGTGA TCGACTCGCG CGGACGCGGC GGGGCGCTGG TGACGGCCGG CCTCGCGCGG
GCGCTGGGCG ACCGGCACCG CGGCGTGGGG TTCGACCAGC TGGCCGAGAT CCGCGATCAG
GAGGGGGCGG ATTGCGCGCT CGACTTCTGG AACTCGGACG GCTCGCGCTC GGGCACCTGC
GGCAATGCCA CCCGCTGCGT CAGCGATTAT CTGATGCGGG ATCTGGGCCG GGACGAGGTG
ACGCTAGTCA CCGCGCGCGG CCACCTGCAT GCGCGCCGGC GCGAGGACGG GCTGGTGGCG
GTAAACATGG GCGCGCCGCA GCTTCTGTGG TCCGAGATCC CGCTCGCCCG CGCGATGGAG
ACGGACAGCC TGCCGCTCGA GGGCGGGCCC GCGGCGGTGG GCATGGGCAA TCCGCATTGC
GTCTTCTTCG TGGAGGACGT CGAGGCGGTC GATCTGGCGG GGCGGGGGGC GTCGGTCGAG
ACCGATCCGC TGTTTCCCGA ACGCACGAAC GTGGAATTCG CAAGCCTGAT CGGCCCCGAC
CGGCTGCGGC TGCGCGTCTG GGAGCGCGGG GCGGGCATCA CGCTGGCCTG CGGCTCGGGC
GCCTGCGCCA CCGCGGTGGC GGCGGCCCGG CGCGGCCTGA CGGGGCGGCA GGTGCGGCTC
GAGATGGACG GCGGCGTGCT CGAGGTGGAC TGGCGCGACG AGGGGGTCTG GCTCTCGGGG
CCGGTCGCGC GGGTGTTCGA GGGGCATCTC TCGCCCGAGA TGATGGCGCT GGCATGA
|
|---|
| Protein sequence | MDMGASSGLG FMKMHGAGND FVVIDSRGRG GALVTAGLAR ALGDRHRGVG FDQLAEIRDQ
EGADCALDFW NSDGSRSGTC GNATRCVSDY LMRDLGRDEV TLVTARGHLH ARRREDGLVA
VNMGAPQLLW SEIPLARAME TDSLPLEGGP AAVGMGNPHC VFFVEDVEAV DLAGRGASVE
TDPLFPERTN VEFASLIGPD RLRLRVWERG AGITLACGSG ACATAVAAAR RGLTGRQVRL
EMDGGVLEVD WRDEGVWLSG PVARVFEGHL SPEMMALA
|
|---|
| |