| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2534 |
|---|
| Symbol | |
|---|
| ID | 4895431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2668681 |
|---|
| End bp | 2669184 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640113133 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001044408 |
|---|
| Protein GI | 126463294 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.271867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.93917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC CCTTCGTGAT GTATCCCGAC AAGCGGCTGA AGACCGTGGC CGCCCCCGTC
GAAGCGGTGA CCGACGAGAT CCGCGCCATC TGGACCGACA TGATCGAGAC GATGGATGCG
ATGCCGGGCT ACGGTCTGGC CGCGCCGCAG ATCGGGGTGA TGCTCAGGCT CGCGGTGGTG
GATTGCTCGG AGAGCCGCGG CAAGGCCATC CGGCTCGCGA ACCCCGAGAT CCTCCATGCC
TCGGGGCAGT TCCGCGAGCA TGAGGAGGGC AGCCCCAACC TGCCGGGCGC CAGCGCCGTC
GTCTCGCGGC CCCGGGCGGT CACGGTGCGC TTCCTGAACG AGGCGGGCGA GACCGAGGAG
CGCGATTTCG TCGACATCTG GGCCACCTCG GTCCAGCATC AGATCGACCA TCTGGACGGC
AGGCTCTATA TCGACCGCCT CTCGCCCCTG AAGCGCAAGA TGGTGGTGGC GAAGTCCGAA
AAATACCTGC GCCGGGTGGG CTGA
|
|---|
| Protein sequence | MIRPFVMYPD KRLKTVAAPV EAVTDEIRAI WTDMIETMDA MPGYGLAAPQ IGVMLRLAVV
DCSESRGKAI RLANPEILHA SGQFREHEEG SPNLPGASAV VSRPRAVTVR FLNEAGETEE
RDFVDIWATS VQHQIDHLDG RLYIDRLSPL KRKMVVAKSE KYLRRVG
|
|---|
| |