Gene Rsph17029_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2473 
Symbol 
ID4896548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2605491 
End bp2606132 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content75% 
IMG OID640113071 
Producthypothetical protein 
Protein accessionYP_001044347 
Protein GI126463233 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.204579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGACC CGCTTCGCCG AGCTGCCGAC GACCCCGACC TGCGGCTGAT CGAGACGCTG 
CTCTGGGACG GGATGCGGCT GATCCGGTTG CGCCGGCATC TCCAGCGGCT CGAGACGGCG
GCCTCGCGTC TGGGCTGGTG CGCGGCGGGC GCGGGCGCGG CGCTGAAGGC CGCGGTGCCC
GAGGGGCCGG CGCGGATGCG CCTCACGCTC GATGGCGTGG GCCGACTGTC CGTCGAGGCA
GCGCCCCTGC CGGCCGCGAA GCCGGTCTGG CGGGTGGGGC TTGCCGCCGA ACGGCTCGCC
TCGGGCGATC CGTGGCTGCG GGTGAAGTCG AACCGACGGG CGGCCTACGA TGCAGCGCGG
GCGGACCTGC CCGCGGATCT CGACGAGCGG CTCCTGCTGA ACGAGCGCGG CGAGGTCTGC
GACGGCACGA TCACCACGGT CTTCTTCGAT GCGGGCGAGG GGATGCGGAC CCCGCCGCTC
GAGGCGGGCC TCTTGCCCGG GATCCTGCGC GAGACCATGC TCGAGACCGG GCGGTGCCGC
GAGGCGCCGC TGCCGGGGGA GGCCCTGCCA CGGGTGCGGC TCTGGGTCGG CAATTCGCTG
CGCGGGCTGA TCCCGGCGGA ATGGGCGGAC GAGACGCCCT GA
 
Protein sequence
MEDPLRRAAD DPDLRLIETL LWDGMRLIRL RRHLQRLETA ASRLGWCAAG AGAALKAAVP 
EGPARMRLTL DGVGRLSVEA APLPAAKPVW RVGLAAERLA SGDPWLRVKS NRRAAYDAAR
ADLPADLDER LLLNERGEVC DGTITTVFFD AGEGMRTPPL EAGLLPGILR ETMLETGRCR
EAPLPGEALP RVRLWVGNSL RGLIPAEWAD ETP