| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2282 |
|---|
| Symbol | |
|---|
| ID | 4895576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2413013 |
|---|
| End bp | 2413498 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640112877 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_001044156 |
|---|
| Protein GI | 126463042 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.307537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCAGA AGCCGCCGTC CTCGGTGCTG TTCTGCTGCG ACCACAATTC GGTCCGCTCG
CCGATGGCGG AGGGGCTGAT GAAGAAGCTC TACGGCCGGC AGGCCTATGT GCAGTCGGCC
GGCGTGAAGA ACGACCGCGA GATCGACGGC TTCACCGTCG CCGTCTGTCA GGAGATCGGG
GTCGAGCTGT CGCGTCACCG CGCGCGCTCC TTCGAGGAGA TGATGGACTG GGGCGACGAT
CTGTCGGGGT TCGATCTGAT CGTGGCGCTC TCGCCCGCGA GCCAGCGGAT GGCCCTTGAA
CTCACCCGAT ATTATCACCT TGATGTGGAA TATTGGCCGA TCATGGATCC GACGGGGCTG
GGCGAGGGGC GCGAGCAGAA GCTCTCCGTC TACCGGCAGG TGCGCGACCA GATCCGCGGC
CGGATGGTGG CGCGCTTCGG CACGCCGCGG GACGGGGCAG AGGAGAGGGA TGATGACGGG
ACGTGA
|
|---|
| Protein sequence | MPQKPPSSVL FCCDHNSVRS PMAEGLMKKL YGRQAYVQSA GVKNDREIDG FTVAVCQEIG
VELSRHRARS FEEMMDWGDD LSGFDLIVAL SPASQRMALE LTRYYHLDVE YWPIMDPTGL
GEGREQKLSV YRQVRDQIRG RMVARFGTPR DGAEERDDDG T
|
|---|
| |