| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2225 |
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| Symbol | |
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| ID | 4896431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2356414 |
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| End bp | 2358501 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640112819 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001044100 |
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| Protein GI | 126462986 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.616046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.73747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC GCCTCAACCT GCGCGTGCGG ATCCTGCTCT TCTTCGCGGC GCTCGCGGGC
GGGGCGAATG TGGCGGTGGC GATCGGGCTC TTCCTCGCCT ACCGGCGCCT CGACGCCCCC
GAGCTTCTGC CCGCCTTCGA GCAGGTGGGT CTGGTGGCGG GGCTCGTGAT CCTCGGGCTC
GTCACCTGGA TCTGGTATCT CTTCGACGCC AATGTGGCGC TGCCGATCAT CCGGCTGGCC
TCGAAGCTGC GCGCCCGCGC CCATGCCCGC ATCGACGGCG GCATCGAGGA GCCGACCGCC
CGCTATCTGG GCGATCTGGC GCCGGCCGCC TCGGCGACCG CCCTCACCCT CGCCGAGACG
CGCGACGCGC TGGCCGAGTC GGTGGCGCGC GAGACCTCGC GGCTGTCCTC GGAGAAGGCG
CGGCTCGAGG CGCTTCTGTC GGACGTGCCA GTGGGGCTGC TGCTCTGCTC GGGCGACCAT
CAGCTCGTCT TCTACAACGG CCCCGCCACC GATCTGATGA ATACGGCCGG CGCGCCGGGG
CTCGACCGCA ACCTCTTCGA CTATCTGCGC GACGGGCCGA TCCGCCATGC GCACCGGCGG
CTGATCGAGG CGGGCGACCC GGATGCGGCC TCGGACATCC TCTGCACCAC GGTCGTGGGG
GCGCGGGTGC TGGCCGCTCG GATGCGGCTG ATCGGAGGCG AGACGACGAA GCCCGGCTAT
GTGCTCACGC TGCGCGACGT GACCTCGGCG CTGGCCTCCT ACGCCCGGCG CGAGGCCCTG
CTGGCCGAGG TCTTCGACCG GATCCGGCGG CCGGCGGCGA ACCTCCAGAC GCTGTTCGAG
GTGCTGCCGC CCGGCAGCTG CCCGCCGCCC GACATGGACC GCGCGCTGCG GCAGGAGGCG
GCGGGTCTCG CCGCCGCCGT GACCGAGCTC GGCGCGCGCC ACGACGAGAG CCGCCACGAT
GGCTGGCCGC TGTCGCTCAC CCGCGCCTCG GACCTGCTCG ATGGGCTGCA CGCCCGGATG
GAGCAGGCGG GCCTCTCGGC CGAGATCGGC GAGGCGCCGC TCCTCCTGCG CTGCAACGGC
TTCGAGGTGA TCGGCCTCGT GGCGACGCTG GCCGCCCGGG TGGCGGCGCG GCGCACCGGC
CACGATTTCC GCGTGACCCT GACCGAGGAC GGCACCGAGG CCATGCTGCG GCTCGTCTGG
CACGGCGAGC CGCTGCCCGT GGGCCTTCTC GAGGACTGGC TCGGCGAGCC GCTCGAGCCG
GGCGTGCCCG AGGTGACGGG GCGCACGGTG CTCTCGACCC ACACGACCGA GATCTGGCCC
GAGCCCGCGG GGGCCGGCGC CTCCGCCCTC TGCCTGCCGC TGCGCACCGC GCGCCGCACG
GGCCGCCGCC CGCGGCCCAT TCCGCGCGCC GTGGTCTATG ATTTCGAGCT TCTGTCGAAG
GCGCGTTACG AGAAGGTGGC CGAGGCGCGG CTCGAGGATC TGACCTATGT GGTCTTCGAT
ACCGAGACGA CGGGCCTCAT GCCCTCGCAG GACGAGATCG TGCAGATCGC GGCGGTGCGG
ATCGTGAACG GCCGCCGGGT CGAGGCCGAG GTGCTCGACA CGCTGGTCAA TCCGCACCGG
CCGATCCCGC CCTCCTCGAC CGAGGTCCAT GGCATCACCG ATGCGATGGT GGCCGAGGCG
CCCGACATCG TCGAGGTGGG GCGCCGCTTC CACAAGTTCG CCGAAGGCGC GGTGCTGGTG
GCCCACAACG CCCCCTTCGA CATGGAATTC CTGCGCCGGG CCGAGCCGCT GATCGGCCGC
CGCTTCGACA ATCCGATCCT CGATACCGTG CTGCTCTCGG CGGTGCTCTT CGGGCAGAGC
GACGTGCACA GTCTCGACGC GCTGACCCAC CGGATCGGTA TCACCATCCC CGAGGAGGCG
CGGCACACGG CCATCGGCGA CACGGTGGCC ACGGCGGATG CGTTCCTCAA GCTGCTGCCG
ATGCTGCAGG GGCGGGGGTT CGAGACCTTC GGCGCCGTGC TCTCGGAGGT GCGCCGGCAC
GGACGGCTGC TCAAGGATCT GAACGAGCCG CATCTGACCG ACGCCTGA
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| Protein sequence | MLDRLNLRVR ILLFFAALAG GANVAVAIGL FLAYRRLDAP ELLPAFEQVG LVAGLVILGL
VTWIWYLFDA NVALPIIRLA SKLRARAHAR IDGGIEEPTA RYLGDLAPAA SATALTLAET
RDALAESVAR ETSRLSSEKA RLEALLSDVP VGLLLCSGDH QLVFYNGPAT DLMNTAGAPG
LDRNLFDYLR DGPIRHAHRR LIEAGDPDAA SDILCTTVVG ARVLAARMRL IGGETTKPGY
VLTLRDVTSA LASYARREAL LAEVFDRIRR PAANLQTLFE VLPPGSCPPP DMDRALRQEA
AGLAAAVTEL GARHDESRHD GWPLSLTRAS DLLDGLHARM EQAGLSAEIG EAPLLLRCNG
FEVIGLVATL AARVAARRTG HDFRVTLTED GTEAMLRLVW HGEPLPVGLL EDWLGEPLEP
GVPEVTGRTV LSTHTTEIWP EPAGAGASAL CLPLRTARRT GRRPRPIPRA VVYDFELLSK
ARYEKVAEAR LEDLTYVVFD TETTGLMPSQ DEIVQIAAVR IVNGRRVEAE VLDTLVNPHR
PIPPSSTEVH GITDAMVAEA PDIVEVGRRF HKFAEGAVLV AHNAPFDMEF LRRAEPLIGR
RFDNPILDTV LLSAVLFGQS DVHSLDALTH RIGITIPEEA RHTAIGDTVA TADAFLKLLP
MLQGRGFETF GAVLSEVRRH GRLLKDLNEP HLTDA
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