Gene Rsph17029_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1986 
Symbol 
ID4895667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2105064 
End bp2106011 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID640112580 
Productinner-membrane translocator 
Protein accessionYP_001043862 
Protein GI126462748 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.800217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.428497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TGTTCGAGAT CCTTCTCTCC GCGACCTTCT GGGCCGCGGC GGTCCGCATC 
GCCTCGCCGC TGATCTTCGC CACCATGGGC GAACTCATCT GCGAGCGGGC GGGCGTGCTG
AACCTCGGGA TCGAGGGGAT CATGGCGATC GGGGCCTTCT CGGGCTGGAT CGCGGTCTGG
GCGGGGGCCG GGCTGTGGGA GGGCGTGGCC ATTGCCATGG CGACAGGGAT GCTCTTCGGC
CTCCTCCATG CCGTGCTCGT GGTGCCCTTC GGGCTCTCGC AGCATGTGGT GGGGCTGGGG
GTCACGCTGC TTGCCACCTC GACCAGCTAC TTCGCCTACC GGCTGATCCT GCCCGAGGTC
ACGAGCCCGC CCAGGATCGA GCCCTTCGCC GTCTGGGAGG TGCCGGGCCT GTCGCAGATC
CCGCTTCTGG GGCCCGCGCT CTTTGCCCAG ACCCCGCTCA CCTATGCGGC CTTCGCGGTC
GCGGCGCTGA CCGCGCTTGT CCTCTGGCGC ACGCCGCTCG GCCTTGCGCT GCGGGCGGCG
GGCGAGAATC CGGCGGCGGC GGATGCGCAG GGCCTCTCGG TCACCGGGCT CCGCATCGGC
GCGGTCATGG TGGGGTCGGG GCTGATGGCG GTGGGCGGCG CCTTCCTCAC CCTTTCGGCC
TTCTCGAGCT TCTTCTTCGA GATGGTGAAC GGCCGCGGCT GGATCTGTAT CGCGCTCGTG
GTCTTCGGCG CGTGGCGGCC CGGCAAGGCC GTGCTCGGCG CGCTTCTCTT TGCCGCCTTC
GACGCGCTGC AGGTGCGGCT TCAGCAGACG CCGGTGGGGC AGGTCGTGCC CTATCAGCTC
TTCCTGATGG CCCCCTATGC GCTGTCCATC GCGGCCCTCG TCCTCATGTC GCGCCGGGCC
GAAGTGCCGG CGGCGCTGAT GCAGCCGTTC AACAGGGGAG AACGCTGA
 
Protein sequence
MSALFEILLS ATFWAAAVRI ASPLIFATMG ELICERAGVL NLGIEGIMAI GAFSGWIAVW 
AGAGLWEGVA IAMATGMLFG LLHAVLVVPF GLSQHVVGLG VTLLATSTSY FAYRLILPEV
TSPPRIEPFA VWEVPGLSQI PLLGPALFAQ TPLTYAAFAV AALTALVLWR TPLGLALRAA
GENPAAADAQ GLSVTGLRIG AVMVGSGLMA VGGAFLTLSA FSSFFFEMVN GRGWICIALV
VFGAWRPGKA VLGALLFAAF DALQVRLQQT PVGQVVPYQL FLMAPYALSI AALVLMSRRA
EVPAALMQPF NRGER