Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1986 |
Symbol | |
ID | 4895667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2105064 |
End bp | 2106011 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112580 |
Product | inner-membrane translocator |
Protein accession | YP_001043862 |
Protein GI | 126462748 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.800217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.428497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC TGTTCGAGAT CCTTCTCTCC GCGACCTTCT GGGCCGCGGC GGTCCGCATC GCCTCGCCGC TGATCTTCGC CACCATGGGC GAACTCATCT GCGAGCGGGC GGGCGTGCTG AACCTCGGGA TCGAGGGGAT CATGGCGATC GGGGCCTTCT CGGGCTGGAT CGCGGTCTGG GCGGGGGCCG GGCTGTGGGA GGGCGTGGCC ATTGCCATGG CGACAGGGAT GCTCTTCGGC CTCCTCCATG CCGTGCTCGT GGTGCCCTTC GGGCTCTCGC AGCATGTGGT GGGGCTGGGG GTCACGCTGC TTGCCACCTC GACCAGCTAC TTCGCCTACC GGCTGATCCT GCCCGAGGTC ACGAGCCCGC CCAGGATCGA GCCCTTCGCC GTCTGGGAGG TGCCGGGCCT GTCGCAGATC CCGCTTCTGG GGCCCGCGCT CTTTGCCCAG ACCCCGCTCA CCTATGCGGC CTTCGCGGTC GCGGCGCTGA CCGCGCTTGT CCTCTGGCGC ACGCCGCTCG GCCTTGCGCT GCGGGCGGCG GGCGAGAATC CGGCGGCGGC GGATGCGCAG GGCCTCTCGG TCACCGGGCT CCGCATCGGC GCGGTCATGG TGGGGTCGGG GCTGATGGCG GTGGGCGGCG CCTTCCTCAC CCTTTCGGCC TTCTCGAGCT TCTTCTTCGA GATGGTGAAC GGCCGCGGCT GGATCTGTAT CGCGCTCGTG GTCTTCGGCG CGTGGCGGCC CGGCAAGGCC GTGCTCGGCG CGCTTCTCTT TGCCGCCTTC GACGCGCTGC AGGTGCGGCT TCAGCAGACG CCGGTGGGGC AGGTCGTGCC CTATCAGCTC TTCCTGATGG CCCCCTATGC GCTGTCCATC GCGGCCCTCG TCCTCATGTC GCGCCGGGCC GAAGTGCCGG CGGCGCTGAT GCAGCCGTTC AACAGGGGAG AACGCTGA
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Protein sequence | MSALFEILLS ATFWAAAVRI ASPLIFATMG ELICERAGVL NLGIEGIMAI GAFSGWIAVW AGAGLWEGVA IAMATGMLFG LLHAVLVVPF GLSQHVVGLG VTLLATSTSY FAYRLILPEV TSPPRIEPFA VWEVPGLSQI PLLGPALFAQ TPLTYAAFAV AALTALVLWR TPLGLALRAA GENPAAADAQ GLSVTGLRIG AVMVGSGLMA VGGAFLTLSA FSSFFFEMVN GRGWICIALV VFGAWRPGKA VLGALLFAAF DALQVRLQQT PVGQVVPYQL FLMAPYALSI AALVLMSRRA EVPAALMQPF NRGER
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