Gene Rsph17029_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1963 
Symbol 
ID4895330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2079578 
End bp2080273 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content72% 
IMG OID640112557 
ProductNnrU family protein 
Protein accessionYP_001043839 
Protein GI126462725 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.867281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGACT GGCTGGAATT TGCGGCGGCG CTGGCGGCCT TCTTTGCCTC GCACCTGCTG 
CCCGCGCGCC CCGGCGTGCG CGAGCGGCTG ATCGCGCTGC TGGGCCGGCC GGTCTATTTC
GCCCTCTACG GCACGGTGTC GCTCCTCGTG CTGGGCTGGC TCATCCTCGC CGCAGGCCGG
GCGCCGTTCG TGGAGCTCTG GCCGCAGACG CCTGCAACGC GCTGGGTGCC GAACTTGTCG
GCGCCCGTGG TCTGGACCCT CGTCGTGCAG GGGATCGGGC TGCCCTGGCC CTGGACCCTC
GGCGGGCGGC GCAGCGCGGC TTTCGACCCC GACCGGCCGG GCTTTGCGGC CATCACGCGC
CACCCGCTGC TCATTGCGCT GATGCTCTGG TCGGCCGCCC ATCTTTTTCC GAACGGCGAT
CTGGCGCATG TCATCCTGTT CGGCACCTTC TTCGGCCTCT CGCTGGCGGC CATCCCGATG
TTCGACGCCC GGGCCCGCCG GGCCCTGACG CCCGACGAGG CGCGCGCGGC CTTCGGGGCC
ACCGCGCTCT TCTCGCTGCG GCCGCTGGTC GATGCCCACT GGCTGAAGCA GAACGAGGAC
CACCTCTTCC CGCGGCTTCT GGCGGTCGTG GCGCTCTGGG CCGCGGCGCT GACGCTGCAT
CCGATCCTGC TGGGTGTGTC GCCGCTGCCG CTCTAG
 
Protein sequence
MTDWLEFAAA LAAFFASHLL PARPGVRERL IALLGRPVYF ALYGTVSLLV LGWLILAAGR 
APFVELWPQT PATRWVPNLS APVVWTLVVQ GIGLPWPWTL GGRRSAAFDP DRPGFAAITR
HPLLIALMLW SAAHLFPNGD LAHVILFGTF FGLSLAAIPM FDARARRALT PDEARAAFGA
TALFSLRPLV DAHWLKQNED HLFPRLLAVV ALWAAALTLH PILLGVSPLP L