Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1963 |
Symbol | |
ID | 4895330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2079578 |
End bp | 2080273 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640112557 |
Product | NnrU family protein |
Protein accession | YP_001043839 |
Protein GI | 126462725 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.867281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGACT GGCTGGAATT TGCGGCGGCG CTGGCGGCCT TCTTTGCCTC GCACCTGCTG CCCGCGCGCC CCGGCGTGCG CGAGCGGCTG ATCGCGCTGC TGGGCCGGCC GGTCTATTTC GCCCTCTACG GCACGGTGTC GCTCCTCGTG CTGGGCTGGC TCATCCTCGC CGCAGGCCGG GCGCCGTTCG TGGAGCTCTG GCCGCAGACG CCTGCAACGC GCTGGGTGCC GAACTTGTCG GCGCCCGTGG TCTGGACCCT CGTCGTGCAG GGGATCGGGC TGCCCTGGCC CTGGACCCTC GGCGGGCGGC GCAGCGCGGC TTTCGACCCC GACCGGCCGG GCTTTGCGGC CATCACGCGC CACCCGCTGC TCATTGCGCT GATGCTCTGG TCGGCCGCCC ATCTTTTTCC GAACGGCGAT CTGGCGCATG TCATCCTGTT CGGCACCTTC TTCGGCCTCT CGCTGGCGGC CATCCCGATG TTCGACGCCC GGGCCCGCCG GGCCCTGACG CCCGACGAGG CGCGCGCGGC CTTCGGGGCC ACCGCGCTCT TCTCGCTGCG GCCGCTGGTC GATGCCCACT GGCTGAAGCA GAACGAGGAC CACCTCTTCC CGCGGCTTCT GGCGGTCGTG GCGCTCTGGG CCGCGGCGCT GACGCTGCAT CCGATCCTGC TGGGTGTGTC GCCGCTGCCG CTCTAG
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Protein sequence | MTDWLEFAAA LAAFFASHLL PARPGVRERL IALLGRPVYF ALYGTVSLLV LGWLILAAGR APFVELWPQT PATRWVPNLS APVVWTLVVQ GIGLPWPWTL GGRRSAAFDP DRPGFAAITR HPLLIALMLW SAAHLFPNGD LAHVILFGTF FGLSLAAIPM FDARARRALT PDEARAAFGA TALFSLRPLV DAHWLKQNED HLFPRLLAVV ALWAAALTLH PILLGVSPLP L
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