Gene Rsph17029_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1570 
Symbol 
ID4896266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1650686 
End bp1651396 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID640112160 
ProductABC transporter related 
Protein accessionYP_001043452 
Protein GI126462338 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.755782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.816164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGC CTTTCCTGAT CGGCGAGAGC ATGACGGGCG GCTATGGCGC CGCCGACATC 
CTGCACGGCT GCACGCTGGC CGTGGAGAAA GGCCAGATCG CCGTGATCGT GGGCCCGAAC
GGCGCGGGCA AGTCGACGGC CATGAAGGCG GTCTTCGGGA TGCTGCGCCT GCGGGCCGGC
CATGTGAAGC TGGAGGGCGA GGACATCACC GCCCTCACGC CGCAGGCGCG GGTGGCCAAG
GGCATGGCCT TCGTGCCCCA GACCCACAAC ATCTTCACCT CGATGACGGT GGAGGAGAAC
CTCGAGATGG GCGCCTTCCT GCGGCGCGAC GACATCCGGG GCACGATGGA GCAGGTCTAC
GAGCTGTTCC CGATCCTGAA GGACAAGCGC CGGCAGGCGG CGGGCGAACT TTCGGGCGGG
CAGCGCCAGC AGGTGGCCGT GGGCCGCGCG CTGATGACCC AGCCCAAGGT GCTGATGCTG
GACGAGCCGA CGGCCGGCGT CTCTCCGATC GTGATGGACG AGCTGTTCGA CCGGATCATC
GAGGTGGCGC GCACCGGCAT CTCGATCCTG ATGGTCGAGC AGAATGCCCG GCAGGCGCTG
ATGATCGCCG ACAAGGGCTA TGTCCTCGTG CAGGGCGCCA ACCGCTTCAC CGACACGGGG
CCCGCGCTGA TGGCCGACCC CGAGGTGCGC CGTTCCTTCC TCGGGGGTTG A
 
Protein sequence
MAEPFLIGES MTGGYGAADI LHGCTLAVEK GQIAVIVGPN GAGKSTAMKA VFGMLRLRAG 
HVKLEGEDIT ALTPQARVAK GMAFVPQTHN IFTSMTVEEN LEMGAFLRRD DIRGTMEQVY
ELFPILKDKR RQAAGELSGG QRQQVAVGRA LMTQPKVLML DEPTAGVSPI VMDELFDRII
EVARTGISIL MVEQNARQAL MIADKGYVLV QGANRFTDTG PALMADPEVR RSFLGG