| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1508 |
|---|
| Symbol | |
|---|
| ID | 4895355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1576239 |
|---|
| End bp | 1577906 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640112098 |
|---|
| Product | methane monooxygenase |
|---|
| Protein accession | YP_001043390 |
|---|
| Protein GI | 126462276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.360755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC TCACCTTGAA CAAGATCACC TCGCAGCGCG GAATCTCCGT GGGCGAGGCG
ACCAAGAAGA TCTCCGACCT CGGGTGGAAC CCCACCTACG TTCAGGAGGC GGCGACCTTC
CCGACCGACT ACAAGATCTC GAAGGCGCCG CGCGACCCGA TGAAACAGGT GCTGCGGTCC
TACTTCCCCA TGCAGGAGGA GAAGGACAAC CGCGTCTATG GCGCCCTCGA TGCGGCGCTC
CGCGGCGACA TGTTCCGCAA CGTCGAGCCG CGCTGGGTCG AATGGATGAA GCTGTTCCTG
GCGATCATCC CGTTCCCGGA GATTTCGGCC GCCCGCTCGA TGGCCATGGT GGCCCGCCTT
GCCCCCGGCG AGGATCTGCG CACCGGCTTC ACCATGCAGA TGGTCGATGA GTTCCGCCAT
TCCACGATCC AGATGAACCT GAAGAAGTGG TACATGGAGA ATTACATCGA CCCGGCCGGG
TTCGACATCA CCGAAGAAGC CTTCGGCAAG TGCTACGCGA CCACCATCGG CCGGCAGTTC
GGCGAGGGCT TCATCACCGG CGACACGATG ACGGCCGCCT GCATGTATCT GACGGTGGTG
GCCGAGACCG CCTTCACCAA TACGCTCTTC GTGGCCATGC CCTCGGAAGC GGCGCGCAAC
GGCGACTATG CGCTGCCCAC CGTCTTCCTC TCGGTCCAGT CGGACGAGAG CCGGCACATC
GGCAACGGCC ACTCGCTCCT GATGGCTGCG CTGAAGGAGC CGGAGAACCA TCTGCTGCTC
GAGCGCGACC TGCGCTATGC CTTCTGGCAG AACCACGCCA TCGTCGATGC GGCCATCGGC
ACCTTCATCG AATACGGCAC CACCAACCGC GACAAGGACA AGGAATCCTA CGCGGAGATG
TGGCACCGCT GGATCTTCGA GGACTACTAC CGCACCTACA TGCTCCCGCT CGAGAAATAC
GGGATCAAGG TCCACCACGA CGACGTGCAG GAGGCCTGGA ACCGGATCAC CAAGAAACAC
TACGTCCACA AGGTCGCGCA ATTCTTCGCG GTGGGCTGGC CGGTGAACTT CTGGCGGATC
GAGGCCCAGA CCGACCGCGA CTTCGAGTGG TTCGAGCAGA AATACCCCGG CTGGTATGCC
GAGTTCGGCG AGTTCTGGCG CTGGTATGCC AAGCTCTCGA AGCCCGGCCA GAAGATCATC
ACCTTCAACG AGGAAGTGGG CTACGTCTAT CCGCACCGCT GCTGGTCCTG CCTCGTGCCC
TGCCTCATCC GCGAGGACAT GGTGGTGGAC GAGATCGACG GGCAGCTCCA CACCTTCGCC
CATGAACTCG ACCGCTGGAC GGCCGTCGAG GCCTTCTCGG ACGAGTATCA GGGCCGGCCG
ACCCCGGCGA TGGGCCGCTT CTCGGGCAAG CGCGAATGGG AGACGCTCTA TCACGGCTGG
GATCTGGCCG ACGCCATCAA GGACCTGAAC TTCGTCCGCG ATGACGGCAG GACGCTGACC
CCGCAGCCGC ATCTGCGCTT CGACGACAAG GACATGTGGA CGCTCGACGA CGTGCGCGGC
CATACGCTGC TCTCGCCGCT CACGCTCCTG CGCGAGATGA GCCCCGAGGC GCGCGAGAAG
CACCTGGTGG AATACCGCGC CGGTTTCACC ATCAATCCCT GCCACTGA
|
|---|
| Protein sequence | MTSLTLNKIT SQRGISVGEA TKKISDLGWN PTYVQEAATF PTDYKISKAP RDPMKQVLRS
YFPMQEEKDN RVYGALDAAL RGDMFRNVEP RWVEWMKLFL AIIPFPEISA ARSMAMVARL
APGEDLRTGF TMQMVDEFRH STIQMNLKKW YMENYIDPAG FDITEEAFGK CYATTIGRQF
GEGFITGDTM TAACMYLTVV AETAFTNTLF VAMPSEAARN GDYALPTVFL SVQSDESRHI
GNGHSLLMAA LKEPENHLLL ERDLRYAFWQ NHAIVDAAIG TFIEYGTTNR DKDKESYAEM
WHRWIFEDYY RTYMLPLEKY GIKVHHDDVQ EAWNRITKKH YVHKVAQFFA VGWPVNFWRI
EAQTDRDFEW FEQKYPGWYA EFGEFWRWYA KLSKPGQKII TFNEEVGYVY PHRCWSCLVP
CLIREDMVVD EIDGQLHTFA HELDRWTAVE AFSDEYQGRP TPAMGRFSGK REWETLYHGW
DLADAIKDLN FVRDDGRTLT PQPHLRFDDK DMWTLDDVRG HTLLSPLTLL REMSPEAREK
HLVEYRAGFT INPCH
|
|---|
| |