| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1280 |
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| Symbol | |
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| ID | 4896320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1322803 |
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| End bp | 1324917 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640111867 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001043162 |
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| Protein GI | 126462048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.334632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACG AGAGGCCGGT GGATCAACTG ACCGAGGCGG AAGCCGCGAC CGAGCTTGCA
CGGCTGGCAG AGGCGATTGA GGCTGCGAAT ACCGCCTATC ACACCCATGA CGCGCCGCAG
ATCAGCGACG CGGACTATGA CGCGCTCAAG CTGCGCAACC GGGCCATCGA GGAGCAGTTT
CCGGAGCTCC GCCGGAGCGA CAGCCCGAGC GACCGGGTGG GCGGGGCCCT GGCGGAAGGA
TTTGCGAAGG TCCGCCACGA GGTGCGGATG CTCTCGCTCG AGAATGCGTT CGACCTTGCC
GAGGTCGAGG ACTGGATCGA GCGGATCCGG CGTTATCTCG GCCATGTGGG CGATCTCCTG
TTCACGGCCG AGCCGAAGAT CGACGGGCTC TCGCTGTCGC TCCGCTACGA GAAGGGGCGT
CTCGTGCAGG CGGCGACCCG CGGCGACGGC GAGACCGGCG AGAATGTGAC CGAGAACGCC
CGCACCATCG CGGACCTGCC CACCGAGCTC GACGGCGCGC CGGATCTGCT CGAGGTCCGC
GGCGAGGTCT ACATGAGCCA CGAGGATTTC GCGGCGCTGA ATGGCCGGCA GGAGGCCGCG
GGCCAGCGCC TCTTCGCCAA CCCGAGGAAT GCGGCCGCGG GCTCGCTCCG CCAGCTCGAT
CCGGCTGTCA CCGCCTCGCG TCCGCTGCGC TTCTTCGCCT ATGCCTGGGG CGCCCATTCC
GAGCCGCTGG CCGCCACGCA GCACGAGGCC ATCGCCCGTC TGGCCGCTTT GGGCTTTGCC
ACGAACCCGC TCACCCGCCT TTGCACGGGG CCCGAGGAGC TTCTGGCGCA ACATGCCGAG
ATCGAGCGGC AGCGCGCGGC GCTGGGCTAT GACATCGACG GTGTGGTCTA CAAGGTCGAC
GATCTGGCGC TGCAGCGGCG GCTGGGCTTT CGGGCCTCGA CGCCGCGCTG GGCCATCGCG
CACAAGTTCG CAGCCCAGCT CGCCTGGACC CAGCTCGAGG GGATCGACAT TCAGGTGGGC
CGCACCGGCG CCCTGTCGCC GGTGGCGCGC CTGAAGCCGG TGACGGTGGG CGGGGTCGTG
GTGGCCAATG CCACGCTCCA CAACGAGGAT TACATCGCCG GCCGCGATTC GAAGGGGCAG
GAGATCCGCG GCGGCAAGGA CATCCGCGTG GGCGACTGGG TGCAGGTCTA CCGTGCGGGC
GACGTGATCC CCAAGGTGGC CGATGTCGAT CTCGACCGCC GCCCCGAGGG GGCCGCGCGC
TACCGCTTTC CCGAGACCTG CCCCGAGTGC GGCTCCGAAG CCATTCGCGA GCCGGGCGAT
TCGGTGCGCC GCTGCACCGG CGGCCTGATC TGCCCGGCCC AGCAGGTCGA GCGGCTGAAG
CATTTCGTCT CGCGGGCGGC CTTCGATATC GAGGGGCTCG GCGCAAAGCA GGTCGAGGCG
CTCTGGCGCG ACGGCTGGAT CCGCCAGCCC GCCGACATCT TCGAACTGCC GAACCGCTAC
CGCGAGGGGA TCCAGCGGCT CGAGAACCGC GAGGGCTGGG GGCGGAAGTC GGCCGAGAAT
CTCTTCGCGG CCATCGAGGC GCGGCGGCGC ATCGCGCTCC ACCGGCTGAT CTTCGCGCTG
GGCATCCGCC ATGTGGGCGA AACCACGGCC ACGCTTCTGG CCACCCACTA CGGCTCCTGG
GCCGCTTTCG AGGCCGCGAT GACCCGCGCC GAGGTGGGCG CGGGGCCCGA GTGGCAGGAT
CTTCTCTCCA TCGACGGCGT GGGGGCGGTG CTTGCCACAT CGCTCGTCAC CGCCTTCCAT
CAGGAGGCCG AGCGGGCGGC GGTCGACGCG CTTGCGGCCC ATCTGACCGT CGAGGATGCC
GAGGTGCGCG CCCCGGTCGC GAGCCCCGTC GCGGGCAAGA TCGTGGTCTT CACCGGCACG
CTCGAGAAGA TGTCGCGCGC CGAGGCCAAG GCGCGGGCCG AGGCGCTGGG GGCGAAAGTG
TCCGGTTCGG TCTCGGCCAG GACCGATGTT GTGGTGGCGG GGCCGGGGGC GGGGTCCAAG
GCCAAGCAGG CCGCGGCGCT CGGCATCGAG ACGATCGACG AGGACGGCTG GCTGCGCCTG
ATCGGGGACG CATGA
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| Protein sequence | MQDERPVDQL TEAEAATELA RLAEAIEAAN TAYHTHDAPQ ISDADYDALK LRNRAIEEQF
PELRRSDSPS DRVGGALAEG FAKVRHEVRM LSLENAFDLA EVEDWIERIR RYLGHVGDLL
FTAEPKIDGL SLSLRYEKGR LVQAATRGDG ETGENVTENA RTIADLPTEL DGAPDLLEVR
GEVYMSHEDF AALNGRQEAA GQRLFANPRN AAAGSLRQLD PAVTASRPLR FFAYAWGAHS
EPLAATQHEA IARLAALGFA TNPLTRLCTG PEELLAQHAE IERQRAALGY DIDGVVYKVD
DLALQRRLGF RASTPRWAIA HKFAAQLAWT QLEGIDIQVG RTGALSPVAR LKPVTVGGVV
VANATLHNED YIAGRDSKGQ EIRGGKDIRV GDWVQVYRAG DVIPKVADVD LDRRPEGAAR
YRFPETCPEC GSEAIREPGD SVRRCTGGLI CPAQQVERLK HFVSRAAFDI EGLGAKQVEA
LWRDGWIRQP ADIFELPNRY REGIQRLENR EGWGRKSAEN LFAAIEARRR IALHRLIFAL
GIRHVGETTA TLLATHYGSW AAFEAAMTRA EVGAGPEWQD LLSIDGVGAV LATSLVTAFH
QEAERAAVDA LAAHLTVEDA EVRAPVASPV AGKIVVFTGT LEKMSRAEAK ARAEALGAKV
SGSVSARTDV VVAGPGAGSK AKQAAALGIE TIDEDGWLRL IGDA
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