Gene Rsph17029_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1279 
Symbol 
ID4896299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1321994 
End bp1322707 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content61% 
IMG OID640111866 
Producttwo component transcriptional regulator 
Protein accessionYP_001043161 
Protein GI126462047 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.461363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.257738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAC TGCTGGTGGA GGATGATCCG ACCACGTCCC GCAGCATCGA ATTGATGCTG 
ACTCATGCGA ACCTGAACGT CTATTGCACC GATCTCGGCG AGGACGGGAT CGATCTGGCC
AAGCTCTACG ATTACGATCT CATCCTGCTG GATCTCAACC TGCCCGACAT GAGCGGGCAC
GAGGTCCTGC GCCAGCTCCG CCTTGCGCGG GTGGACACGC CCATCCTGAT CCTGTCCGGC
GCCGACGATA CCGAGAACAA GATCAAGGGC TTCGGCTTCG GCGCCGACGA CTACATGACC
AAGCCCTTCC ACCGCGAGGA GCTGGTCGCC CGCATTCATG CCATCATCCG CCGCTCGAAG
GGCCATGCCC AGTCCGTGAT CCGGACCGGC AAGATCCTCG TCAATCTCGA TGCCAAGACC
GTCGAGGTCG AGGGCAAGCC GGTGCATCTG ACGGGCAAGG AATATCAGAT GCTGGAGCTG
CTCTCGCTGC GCAAGGGCAC GACGCTCACG AAGGAGATGT TCCTTAACCA CCTTTACGGA
GGCATGGATG AGCCCGAACT CAAGATCATC GATGTGTTCA TCTGCAAGCT GCGCAAGAAG
CTGGCCGAGG CCACGGGGGG CGAGAGCTAC ATCGAGACGG TCTGGGGCCG GGGCTATGTC
CTGCGCGATC CGGTGACGAC CGAGACCGAC CGGCGGTTCG CCATCGGCGC CTGA
 
Protein sequence
MRILLVEDDP TTSRSIELML THANLNVYCT DLGEDGIDLA KLYDYDLILL DLNLPDMSGH 
EVLRQLRLAR VDTPILILSG ADDTENKIKG FGFGADDYMT KPFHREELVA RIHAIIRRSK
GHAQSVIRTG KILVNLDAKT VEVEGKPVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LAEATGGESY IETVWGRGYV LRDPVTTETD RRFAIGA