| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0909 |
|---|
| Symbol | |
|---|
| ID | 4895547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 934584 |
|---|
| End bp | 935804 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640111494 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001042792 |
|---|
| Protein GI | 126461678 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.338541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.891076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG ATCTCGCCCG CAAGCTGGCC ATCCTGTCGG ACGCCGCGAA ATACGATGCC
TCCTGCGCCT CGAGCGGGGG CACAAGGCGC GATTCGAAGG ATGGCAAGGG GCTGGGATCC
TCGGGCGGAA GCGGCATCTG CCACGCCTAT GCGCCGGACG GGCGTTGCAT CAGCCTTCTG
AAGATCCTGA TGACCAATTT CTGCATCTTC GACTGCGCCT ATTGCGTGAA CCGCGTCTCC
TCGCGGGTCG AGCGGGCGCG GTTCTCGGTC GAAGAGGTGG TGACGCTCAC CGTCGAATTC
TACCGGCGGA ACTATATCGA GGGGCTCTTC CTCTCGTCGG GCATCATCCG CTCGCCCGAT
GACACGATGG CTGACATGGT GCGCATCGCC AAGACCCTGC GCGAGCGCGA GCATTTCCGG
GGCTACATCC ACCTCAAGAC CATTCCCGAC GCCGCGCCCG AGCTGATCGA GCAGGCGGGC
CTCTATGCCG ACCGGCTGTC GATCAATGTG GAGCTGCCGA CCGAAGCCGG GCTCGACCGC
TTCGCGCCGG AGAAGTCGGC GACCGGCATC CGCAAGGCGA TGGCCGAGGT GCGGCTGAAG
CGCGAGGCCT CGCGCGAGCC GAGCTTCTCC GGCCGCAGAC CCTCGCGCTT CGCGCCGGCC
GGTCAGTCCA CCCAGATGAT CGTGGGGGCT GACGGGGCGG ACGATGCGGC CATCCTCGGC
AATGCCTCGA CGCTTTATGC CAACTACGGT CTGAGCCGGG TCTATTACTC GGCCTTCTCA
CCCATTCCCG ATGCCTCGAA GGCGCTGCCC CTCGTGCGTC CGCCGCTCCT GCGCGAGCAT
CGGCTCTATC AGGCCGACTG GCTTCTGCGC TTCTACGGCT TCGAGGTGGG CGAGATCGCG
GACAAGGGGA TGCTCGATCT CGAGGTCGAT CCGAAGCTCG CCTGGGCGCT GGCGCATCGC
GAGGCCTTTC CGGTGGATGT GAACTGCGCC CCGCGCGAGA TGCTGCTGCG GGTGCCGGGC
TTCGGCACCA AGACGGTGGG CCGGATCCTT GCCGCGCGGG CGCACGGGGC GGTGCGCTAC
GAGCATCTGG TGGCGATGGG CGCGGTGCTG AAACAGGCGC GCCCCTTCAT CGTGGCCCCT
GGCTGGCGGC CGCAGGGGCT GGACGACGCC AGCCTGCGCG CGCGCTTCGT GCCGCCGCCG
GAACAGTTGA GCCTCTTCTG A
|
|---|
| Protein sequence | MKKDLARKLA ILSDAAKYDA SCASSGGTRR DSKDGKGLGS SGGSGICHAY APDGRCISLL
KILMTNFCIF DCAYCVNRVS SRVERARFSV EEVVTLTVEF YRRNYIEGLF LSSGIIRSPD
DTMADMVRIA KTLREREHFR GYIHLKTIPD AAPELIEQAG LYADRLSINV ELPTEAGLDR
FAPEKSATGI RKAMAEVRLK REASREPSFS GRRPSRFAPA GQSTQMIVGA DGADDAAILG
NASTLYANYG LSRVYYSAFS PIPDASKALP LVRPPLLREH RLYQADWLLR FYGFEVGEIA
DKGMLDLEVD PKLAWALAHR EAFPVDVNCA PREMLLRVPG FGTKTVGRIL AARAHGAVRY
EHLVAMGAVL KQARPFIVAP GWRPQGLDDA SLRARFVPPP EQLSLF
|
|---|
| |