| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91200 |
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| Symbol | |
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| ID | 4840948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 518342 |
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| End bp | 521272 |
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| Gene Length | 2931 bp |
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| Protein Length | 947 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392263 |
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| Product | predicted protein |
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| Protein accession | XP_001386493 |
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| Protein GI | 150866782 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5096] Vesicle coat complex, various subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGT CTGGATACAC ATTGATCTAC GACCCCAATG CGGCGTCCAA GACCTCAGTC
AATGAGTTCA AAACTCTCCT CGAAAAAGGA AAAGATGAAG CCAAGGTTGA GGCCATGAAG
AAGATCTTGA TTCTGATTCT CAACGGTGAC CCCATGCCCG ATTTGTTGAT GCACATCATC
AGATTTGTGA TGCCCTCCAA AAACAAGGAG TTGAAGAAGT TGCTCTACCA CTATTGGGAA
GTTTGTCCCA AGATGGACGA TCAGGGCAAA ATGAGACACG AGATGATTCT TGTTTGTAAC
GCTATACAGA GAGATTTACA ACATCCTAAC GAGTACATCC GTGGAAATAC GTTGAGGTAC
TTGACGAAGT TGAAGGAGGC AGAATTGTTG GAAACTTTGG TACCAAATGT CCGCCAGTGT
CTTGAACACA GACACGCCTA TGTGAGAAAG AATGCTGTGT TTGCGCTTCA TTCCATCCAC
AAGGTCAACG ACCATTTGGT TCCCGATGCG GACGAGCTTA TCTACAAGTT TTTGTATGAG
GAAAGTGACT CGGTTTGTAA GAGAAATGCT TTTGTCTGTC TTGGAGACTT GAACAGAGAC
GCATCCTTAC AGTATATCCA AGATAACATT TCCATTATCG AGACGTTGGA TCCGTTGTTA
CAGCTTGCCT TCATCGAGTT CATCCGTAAG GATTCGGTCC AGAACCCAGT GTTGAAGTCT
CAGTACACGA ACTTGGTGAC AGATATCATT GAAAGTTCTT CCAACGTAGT TGTATACGAA
GCAGCCAATG CCTTGACGGT CTTGTCCAAC AATCCACAGT CTATCTTGTT GGCTGGTAGC
AAGTACGTCG AGTTGGCCAC CAAAGAAGCT GACAATAATG TCAAGATCAT CACTCTTGAG
AGAATTAACG ACCTCCACAA AAAGAACCCG GGTGTTCTTC AAGAGTTATC TTTGGAAATC
TTGAGAGTAT TATCATCGCA AGACTTAGAC GTACGTAAAA AGGCTCTTGA CGTTACTTTG
CAGTTCGTTA CCAGCAGAAA TGTAGAAGAT GTGGTGAAGT TGTTGAAGAC TGAGTTGCAG
AGAACTTCGT CGGCTAATGA AGATAAGAGC GCTGAATACA GACAATTATT GATCAACGCC
ATCCACCAAT TGGCCATCAA ATTTGTCGAA GTTGCAGCCA ACGTCATAGA TTTGTTGTTG
GAGTCCATGA GTGACTTAAA CACCACTGCT GCTTACGAAG TTATCACTTT TGTTAAAGAA
GTCGTGGAAA AGTTCCCAGA CTTGAGAAAG ACCATAATAA CCCGGTTGAT CAGCGTGTTG
CCTTCTATCA AAAGTGGAAA GGTCTTCCGT GGAGCATTCT GGATTATTGG TGAATATGCT
CTTGAAGAAA GCTTAGTTCA AGAAGCATGG AAATACATTA GATCTAGCAT TGGAGAGGTT
CCTATTGTAG CCAGTGAAAA GAGAGCTGCC GAAGGAAATG CCCCAGATGT AGAAGAATAC
TCCAACGGAT CTACTGAACA TACAAAGAAG GGACCTGTAG TTTTGCCCGA TGGTACCTAT
GCTACTGAAA GTGCTTTGAC TGCTGAAGTA AAGGATACCA GCAACGATGA GAAGCCTCCA
GTTCGTAAAC ATATCTTGGA CGGAGACTTT TATCTTGCTG CCGTGTTGTC CTCTACTTTG
GTCAAATTGG TTTTGAGATT ACATCGTTTG AAGGCTCTGC AATCGGTGTT GAATGCTTCT
AAGGCTGAGG CTTTATTGAT TATGGTTTCG ATCTTGAGAG CAGGTGAGAG TTCATATGTA
GCCAAGAAGA TCGATGAAGA CTCAGCTGAT CGTATTCTCT CATACATCAA GGTATTGAAT
GAAGAAGATG ATTTGGAATT AATCCTGGCC GGGTTCTTGG ACGAAACCAA AGATGCCTTC
ACTGCCCAGA TTCAGAGCGC CGAGCTCAAG AAGGCAGAAG AGCAAGCCAG AGATTTCCAC
GAAAACGCTG AGCAGGTGGA CGGTTCTATT GTTTTCAGAC AATTCGACAA GGATAATGCT
GCCAAGAGTG CTGCTGTTGA TGATGTATCA TTGGCAAGTG GTAGTGCATT AAAGAAGGAA
GACTTGTCGT CCAGATTAAA CAAGATCTTA CAATTGACAG GATTCTCTGA TCCAATCTAT
GCCGAAGCCT TTGTCAAGGT TCACCAATAC GACGTCACCT TGGATGTCTT GTTGGTTAAC
CAAACCACTG CTACGTTGCG TAACTTGTCA ATTGAGTTTG CTACTCTTGG TGATTTGAAG
GTTGTGGACA AGCCTGCTAC AGCCAACGTA GGTCCACATG GATTCTACAA AATTCAAACC
ACAGTGAAGG TCACCTCAGC AGACACTGGT GTCATCTTTG GTAACATTGT CTACGATGGC
CAACACTCTG ATGAGTCTAC CATTGTGATC TTGAACGACG TTCATGTGGA TATCATGGAT
TATATTAAGC CTGCCACTTG TTCTGAAAGC CAGTTCCGTA AGATGTGGAA CGAATTCGAA
TGGGAAAACA AGATCACCAT CAAGTCACAG ATTCCTACTT TGAAGGAATA CTTGGACGAA
TTGATGAAGG GCACCAACAT GAACTGTTTA ACTCCCGGTG CTGTCATAGG AGAAGAATGC
CAGTTCTTGT CTGCTAACTT GTACTCTCGC TCATCGTTTG GTGAAGATGC CTTGGCCAAC
TTGTGTATTG AAAAGCAGAG TGACGGTCCA ATAATTGGCC ATGTTAGAAT AAGATCCAAG
GGTCAGGGTT TGGCATTGTC GTTGGGTGAC AGAGTTGCAT CAATTTCCCG TAAAAACAAG
CCAGCAAGTG TGATCAAGGT CTAAAACATT TATTTCGTTT TATTGTATTC ACTAAATGTA
TAGTGTATAA TCAAAACTTC ATATACAAAT CATTTACATA TATTATATTA A
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| Protein sequence | MSESGYTLIY DPNAASKTSV NEFKTLLEKG KDEAKVEAMK KILISILNGD PMPDLLMHII
RFVMPSKNKE LKKLLYHYWE VCPKMDDQGK MRHEMILVCN AIQRDLQHPN EYIRGNTLRY
LTKLKEAELL ETLVPNVRQC LEHRHAYVRK NAVFALHSIH KVNDHLVPDA DELIYKFLYE
ESDSVCKRNA FVCLGDLNRD ASLQYIQDNI SIIETLDPLL QLAFIEFIRK DSVQNPVLKS
QYTNLVTDII ESSSNVVVYE AANALTVLSN NPQSILLAGS KYVELATKEA DNNVKIITLE
RINDLHKKNP GVLQELSLEI LRVLSSQDLD VRKKALDVTL QFVTSRNVED VVKLLKTELQ
RTSSANEDKS AEYRQLLINA IHQLAIKFVE VAANVIDLLL ESMSDLNTTA AYEVITFVKE
VVEKFPDLRK TIITRLISVL PSIKSGKVFR GAFWIIGEYA LEESLVQEAW KYIRSSIGEV
PIVASEKRAA EGNAPDVEEY SNGSTEHTKK GPVVLPDGTY ATESALTAEV KDTSNDEKPP
VRKHILDGDF YLAAVLSSTL VKLVLRLHRL KASQSVLNAS KAEALLIMVS ILRAGESSYV
AKKIDEDSAD RILSYIKVLN EEDDLELISA GFLDETKDAF TAQIQSAELK KAEEQARDFH
ENAEQVDGSI VFRQFDKDNA AKSAAVDDVS LASGSALKKE DLSSRLNKIL QLTGFSDPIY
AEAFVKVHQY DVTLDVLLVN QTTATLRNLS IEFATLGDLK VVDKPATANV GPHGFYKIQT
TVKVTSADTG VIFGNIVYDG QHSDESTIVI LNDVHVDIMD YIKPATCSES QFRKMWNEFE
WENKITIKSQ IPTLKEYLDE LMKGTNMNCL TPGAVIGEEC QFLSANLYSR SSFGEDALAN
LCIEKQSDGP IIGHVRIRSK GQGLALSLGD RVASISRKNK PASVIKV
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