| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85702 |
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| Symbol | STH1 |
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| ID | 4841094 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 230073 |
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| End bp | 234486 |
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| Gene Length | 4414 bp |
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| Protein Length | 1259 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640392409 |
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| Product | Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) |
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| Protein accession | XP_001386641 |
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| Protein GI | 150866895 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.250535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATCGAATCTA ATTGTGCAAA CAATCAATCT TCGGAGCAGA AACGCTTGAA TAAGCACACA
CACAAATACA GAAAACGCCA CCTATACAGC AGCTGTTGCT CACGTATTCA GCCTGTTCCG
TTTTTCAGTT TTTCTGCAGT TTTTTTTCCC TTATTCTTTC AATTCTGGAT CGATCAAAAC
TCATAATACT CCGTCTGGTG AATATTGAAT ATTCCTACAT CCATCATTTT TTCACGAAAA
ACAAAAACTT TTTGCAGCCC AACAATTCAT AGACACCGTA GTTGAGAGAA CTACTGGTAT
ATTTATATTG GATTGAGAGA GTAAAAGATA TTCAAAGATT TTGAAAGATA CTTAGTCAAA
TAATTATTCC GTACAATTAT CGCTAATATT ATTCCTTTTA TCATGAACGG TTCCACAACT
TTGGCCAATG GATCCAAAGA TAGCTATCCC TACCAGCAGA GCAGCTCTCT CCAGAATAAT
ACTATAGAAC CTGTGATAGA GATCCCTACC ACCAAGGAGC AGTTGACTGA ATTACTCGAA
AGATACTACA AGTTGTTGAG AACTGGCCAG CAATTAAAGC GTGAATATGA TGAACAAGTT
CTTTCACACA AGTCTGCCAA TGGGAGCTCT GCGTTGTCTA CTTCCGATGG AAATAGTTTG
TTGACTGGAA CGAATTCTAT TGGCTTTGAT GCGTCAACCA ACTCGTCTGT AGTTCATGAC
CTGAAGCCCC CACCATTTTT TGATGCCACT GAAAAGGAAA GAATTCTTAT AGAAAAGGTT
TTGGCTACGA TTTCCGACAA GCAGCAGCAG TTTCTAGACG AAGAGGCCCA ATTTTATGAG
GAAATCTTGC AAGAATCCTC CACTAAAATT GAATCACAGC TTGATAAAGA CATTTTCGAA
AAGCAGATAG CCAGTTTGCA ACTCTTGTCG AAAGATATAG ACTTGCCTGA AACCATACAG
AGTGAATTAG CTAGCTCAGT AGTTGACGTT AAGGAAGATG CTGTTAGTAT AGTCGACGAA
GGCTTGGACA GTATCTTGAA ACTGTTATCG ACGTACAGTC AAGATTTTCA AGAGAGAGCA
AAGAGATTAG GAATAAAGAT ACCGGTTCCC TCTACTTCTG TGGATCCCTT GCAAGCTCCT
TTGGGCAACT ACTACACAGA AAAAATTATC ACAAGCAAGA TCGCCAATCG TTTGAGGGAG
TTGGAGAATT TGCCAGGCAA CTTGGGGACA TTTGGAGACG ATGTTGAAAT AGACGATTTA
AAAATCAAAA CACTCATAGA ATTGAAATCG TTGCGATTGT TGCCAAAGCA GAAGCAATTG
AAACATAACA TCATAGCCAG TGAAGCCAGT CAAGCCAAAT TTACTCTTCC AGACTTAGTC
AACAACCCCT TGTGTTTGCA AGAAAAGAGA TCCTTCAATG TAAGACCCAA GATTGAGCAA
CCCAATCCAC ACTTGCTAGC CACGCAATTA GAAGAATTGA AGCAGCAAGA AGAGCGCGAG
TTTCAACGTC AATTGCATAT TGCAAAGATT CAGCAAGTAT TGGATAGTTC ATCCTTGTAC
AGCACAGCAA AGTCTTCACG TTACAATTAT AGGTCCAACA TCTTGGTGAA ACAAATCAAC
AATTTCCATC AGAATACCGA AAAGGAAGAG TCCAAGAAGT TGGAAAAAAC CGCCAAGCAG
AGATTGCAAG CATTGAAGGC TAACGATGAA GAAGCCTATA TCAAATTGTT AGACCAAACC
AAGGATCACA GAATCACACA CCTTTTGAAG CAAACCAACC AATTTTTGGA TACATTAGCA
CAACAAGTTA AAGCACAACA GGCAGAAACC TTCATTGAAG ATGTTCCAAT TGAAGAAGTC
AATGGAGAAG AGATTGAAGA AGATACAGTC GACGAGTTAC GTGAGAAGAT TGACTACTAC
CAAGTTGCTC ACCGTATCAA GGAAGAGATT TCTGAGCAAC CAGGTATTCT TATTGGTGGT
AAGTTGAAGG AGTATCAGTT GAAGGGTTTG CAATGGATGG TTTCGCTTTA CAATAATAAG
TTAAATGGTA TTTTAGCAGA TGAAATGGGT TTGGGTAAAA CTATTCAATC TATTTCTTTG
GTTACCTACT TGATCGAAAA GAAGCACGAG GACAAGTTCT TGGTTATTGT ACCTCTTTCT
ACAATCACCA ATTGGACGTT GGAGTTTGAA AAGTGGGCTC CTTCTGTCAG AGTCATAGTC
TATAAGGGTT CTCCACAGCA AAGAAGATCC ATGCAGATGG ATATCAGAAT GGGTAATTTC
CAAGTTATGT TAACTACCTA TGAATACATT ATCCGTGAAA GACCATTGTT AGCCAAATTT
CACTACTCAC ACATGATTAT TGATGAAGGA CACAGAATGA AGAATGCTTC GTCTAAGTTG
TCTATTACAT TAAAGCAATA CTATAAGACC AAGAACAGAT TGATCTTAAC TGGTACTCCA
TTACAAAATA ATTTACCCGA ATTATGGGCT CTTTTAAATT TCGTTTTACC ACGTATTTTC
AACTCTGTCA AGTCTTTTGA CGAATGGTTC AATACTCCAT TCGCCAATAC GGGTGCTCAA
GAGAAGATCG AATTGACCGA AGAAGAGTCC TTGTTAGTCA TCAGAAGATT GCACAAGGTC
TTGAGACCTT TCCTCTTGAG ACGTTTGAAG AAAGACGTCG AGAAAGATTT GCCAGACAAG
GTAGAGAAGG TGTTGAAGTG TAATTTGTCA GGTTTGCAAT ATGTCTTGTA TCAGCAGATG
TTGAAGCACA ACGCTTTCTT TGTGGGTGCC GACGCTGGTG GAGCCAAGTC GGGTATTAAA
GGTTTGAACA ACAAGATCAT GCAGTTGAGG AAGATCTGTA ACCATCCTTT TGTATTTGAA
GAAGTCGAAG CTGTATTAAA TTCTTCCAAA TTAACTAACG ACTTGATTTG GCGAACCAGT
GGTAAGTTTG AACTATTGGA CAGAGTTTTG CCCAAGTTCA AGGCTAGTGG ACACCGTGTC
TTGATGTTCT TCCAGATGAC TCAAGTCATG GACATCATGG AAGATTTCTT GAGATGGCGT
GACATGAAGT ACTTGAGACT TGACGGTAGT ACGAAGGCTG AAGACAGACA GGAGATGTTG
AAGGTTTTCA ATGCACCAAA CTCAGACTAC TTCTGTTTCC TTTTGTCTAC TAGAGCTGGT
GGTTTAGGTT TAAATTTGCA GACAGCTGAT ACAGTAATCA TTTTCGATAC CGATTGGAAT
CCTCATCAAG ATTTGCAAGC TCAAGACAGA GCCCATAGAA TTGGACAGAA GAACGAAGTG
AGAATCTTAA GATTGATCAC CAACGATTCT GTAGAAGAAG TCATCTTGGA AAGAGCTCAC
CAGAAGTTAG ACATCGACGG TAAGGTTATC CAAGCTGGTA AATTTGACAA TAAGTCGACT
GCTGAGGAAC AGGAAGAGTT CTTGAAGAGA TTGTTGGAAG CCGAAGCTAA TGGAGACGAA
AATGAAGAGA ACGATTCTTT GGACGATGAC GAATTGAACG AGATATTGGC TCGTTCTGAA
GACGAAAAGG TTCTATTCGC TGAGATTGAC GGTCAAAGAA AGAAAGATAT CGAGAGTCAC
TTCAAGTCCA GATTGATAGA GCGGGACGAG CTTCCTACTG TTTTTACGGA GGATATTTCT
CGTCACTTCG AGAAGGATAC CAAGGAGCTC AGTCGTATGA GAGAGAAGAA GAGAGTCAAG
TATGACGATG GGTTAACCGA AGAACAGTGG CTCATGGCCA TGGACGATGA CAATGATACT
GTAGAAGATG CCATCAGAAG AAAAGAAGAG AGAATGGCAA GAAGAAGAAG AAAGGCAGCC
AAAGATGGAG ATCTTTCTGA AGACGACGAA GAAGATTTAG AGGATGATGA AGACGGTTCA
GATGGCCGTA GAAAGAGACA GCGTCGTTCC AGAACTCCGC AAACTTATCG CGACGAAGAT
ATATATGGCG AAGAAGATGA AATTGCTGAT CCTGATGAAA AGGAAGCAGA CGAACTCACT
GTAAAATGTA CAGCTGTCAT CGATGAAATC ATGCAATTGA CAGCTGAAGA TGGCCACAGA
ACGTCCGACA TCTTCCTCAA ATTGCCATCG AGAAAGTTGT ATCTGGATTA CTACCAGATC
ATCAAGCGCC CAGTGTCCAT CAACCAGGTG ATCAAGCACT TACAACAGGA GAAGTTCGAC
ACCTTCGAAG CATTCATCGC TGAGTTGAGG TTGATGTGTG AAAATGCAAA GATATACAAC
GAAGAAAGTT CGTTTGTCTA TGCTGACGCT GCGCAGATCG AGGAAGTGCT TGACCGTGTT
TCGTAATACA TTTAAAAACA TCACATAATT GTACCATATT GCTAATAACA TAATAACACT
ATATATCTAT ATAGTATTTA TTAAATGCTG TACT
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| Protein sequence | MNGSTTLANG SKDSYPYQQS SSLQNNTIEP VIEIPTTKEQ LTELLERYYK LLRTGQQLKR
EYDEQPPPFF DATEKERILI EKVLATISDK QQQFLDEEAQ FYEEILQESS TKIESQLDKD
IFEKQIASLQ LLSKDIDLPE TIQSELASSV VDVKEDAVSL DSILKSLSTY SQDFQERAKR
LGIKIPVPST SVDPLQAPLG NYYTEKIITS KIANRLRELE NLPGNLGTFG DDVEIDDLKI
KTLIELKSLR LLPKQKQLKH NIIASEASQA KFTLPDLVNN PLCLQEKRSF NVRPKIEQPN
PHLLATQLEE LKQQEEREFQ RQLHIAKIQQ VLDSSSLYST AKSSRYNYRS NILVKQINNF
HQNTEKEESK KLEKTAKQRL QALKANDEEA YIKLLDQTKD HRITHLLKQT NQFLDTLAQQ
VKAQQAETFI EDVPIEEVNG EEIEEDTVDE LREKIDYYQV AHRIKEEISE QPGILIGGKL
KEYQLKGLQW MVSLYNNKLN GILADEMGLG KTIQSISLVT YLIEKKHEDK FLVIVPLSTI
TNWTLEFEKW APSVRVIVYK GSPQQRRSMQ MDIRMGNFQV MLTTYEYIIR ERPLLAKFHY
SHMIIDEGHR MKNASSKLSI TLKQYYKTKN RLILTGTPLQ NNLPELWALL NFVLPRIFNS
VKSFDEWFNT PFANTGAQEK IELTEEESLL VIRRLHKVLR PFLLRRLKKD VEKDLPDKVE
KVLKCNLSGL QYVLYQQMLK HNAFFVGADA GGAKSGIKGL NNKIMQLRKI CNHPFVFEEV
EAVLNSSKLT NDLIWRTSGK FELLDRVLPK FKASGHRVLM FFQMTQVMDI MEDFLRWRDM
KYLRLDGSTK AEDRQEMLKV FNAPNSDYFC FLLSTRAGGL GLNLQTADTV IIFDTDWNPH
QDLQAQDRAH RIGQKNEVRI LRLITNDSVE EVILERAHQK LDIDGKVIQA GKFDNKSTAE
EQEEFLKRLL EAEANGDENE ENDSLDDDEL NEILARSEDE KVLFAEIDGQ RKKDIESHFK
SRLIERDELP TVFTEDISRH FEKDTKELSR MREKKRVKYD DGLTEEQWLM AMDDDNDTVE
DAIRRKEERM ARRRRKAAKD GDLSEDDEED LEDDEDGSDG RRKRQRRSRT PQTYRDEDIY
GEEDEIADPD EKEADELTVK CTAVIDEIMQ LTAEDGHRTS DIFLKLPSRK LYSDYYQIIK
RPVSINQVIK HLQQEKFDTF EAFIAELRLM CENAKIYNEE SSFVYADAAQ IEEVLDRVS
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