Gene PICST_85685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85685 
Symbol 
ID4840827 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp95208 
End bp96146 
Gene Length939 bp 
Protein Length120 aa 
Translation table12 
GC content37% 
IMG OID640392142 
Productpredicted protein 
Protein accessionXP_001386619 
Protein GI126140194 
COG category 
COG ID 
TIGRFAM ID[TIGR00012] ribosomal protein L29 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATATAATCAA AATGGTATGT ACTAGCCCTT AAGACATAAG ACGAGTGCAG CAGCATCACA 
GCGAAACAAC GAATACCTAC CGTCTCTCGA AATCCCAGCA TTTGTAGTCC CCATATTCAT
CGAGAAAGAG TTGTCATCTG AAAAATTAAC GAGATAAGTC ATAACGAGAA GAATAGAGTA
AAACTATGAA CAACTCATAC TGTCAACAAG TGAAGAGACA GCCAGCAACA TCCAGCTCAA
GCTGTTCAGT ATAAAGAGTG TAAAAGTAGA CTATCATGAA GAGGTGAAAA ATTTCACCAA
TATATTCCAC CATTTAAAGA AAAGTCATCA AGAACTCTCG GACAAACGAC GAAGTCACTA
TGAGATCACA GGAAAGGCTA CATCCAAATT CGTTACGTTT GCTGTATTCA ACCAACAGAT
TTTCAAACAA TATACTAACA TATTACAGGC CGGTGTCAAA ACTTTCGAAT TAAGAACCAA
GTCCAAGGAA CAATTATCTC AACAATTGGT TGAATTGAAG AAGGAATTGG CCAACTTGAA
GGTCCAAAAG TTGCAAAAGC CTTCTTTGCC AAGAATCCAC ACTGTCAGAA AGAACATCGC
TAGAGTTTTG ACTGTCATCA ACTTGAACCA AAGAGAAAAC GTCAGAGCCT TCTACGCTGG
TAAGAAGTAC CAACCAAAGG ACTTGAGAGC CAAGAAGACC AGAGCTATCA GAAGACAATT
AACCAAGTTC GAAAGATCTC AAGAAACCGA AAAGGCCAGA AAGCAAAGAA TCGCCTTCCC
ACAAAGAAAG TTCGCTATTA AGGCTTAAGT TTTTCAACCT CAAAATCAAT AATAACTATC
ATTTGGGCGT CTTAATGTAT TTTTAGGAAG GAATTCTCAC GTTTTAATAA ACCTTTTCAT
TACAACATAC ATATGTATTT ATAATGTTTA AATATATGT
 
Protein sequence
MAGVKTFELR TKSKEQLSQQ LVELKKELAN LKVQKLQKPS LPRIHTVRKN IARVLTVINL 
NQRENVRAFY AGKKYQPKDL RAKKTRAIRR QLTKFERSQE TEKARKQRIA FPQRKFAIKA