Gene PICST_85470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85470 
Symbol 
ID4841092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp225390 
End bp226347 
Gene Length958 bp 
Protein Length191 aa 
Translation table12 
GC content41% 
IMG OID640392407 
Productpredicted protein 
Protein accessionXP_001386639 
Protein GI126140234 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.210117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACCGTCGTCA ATCAAAATGA AGTACATCCA AACCGATCAA ATCTTAGAAA TCCCAGAAGG 
CGTCCACGTC AACATCAATG CCAGATCCAT CAAGGTCACT GGTCCAAGAG GTGAATTGAC
CAAGGACTTG AAGCACATTG ATGTTACCTT CACCAAGGTC AACAACAGAG CTATCAAGAT
CACTGTCCAC AACGGTGACA GAAAGCACGT TGCTGCTTTG AGAACTGTCA AGTCTTTGAT
TGCTAACTTG ATCACTGGTG TCACCAAGGG TTACAAGTAC AAGTTGAGAT ACGTCTATGC
GCATTTCCCA ATCAACGTTA ACATCGTTGA AAAGGACGGT GACAAGTTCG TCGAAATCAG
AAACTTCTTG GGTGAAAAGA GAGTCAGAAA CGTCAAGATC TTCGAAGGTG TCACCATCGA
ACAATCTGCC AACCAAAAGG ATGAATTGGT TGTTTCCGGT AACTCTTTGG AAGCTGTTTC
CCAAAACGCT GCTGATATCC AACAAATCTG TCGTGTCAGA AACAAGGATA TCCGTAAGTT
CTTGGATGGT ATCTATGTTT CCGAACGTGG TACTATTGTT GAAGAACTCT AAGTTATTGG
TGCTTTGTCC ATAATTTAGT ATCCTTTTTT CCAAGAAGGA GGGTGCTTGT GTACTAATAC
ATTTCTCTTC TTTATATCTT TTTGTTGAGT TTCCAGGGTT TATATAGTTC AATATTTGGT
TTTATTATTG GGTTAACCCT GTCTCAATCG TGGATCGTTA TCGAGCTCAT TACAATGCAG
AGCCACCTAC GATCCACCTG TAGAAGCGCG CAAGAGACGA CGGTTAGATG ATATTGCTAG
CAAAGTTTGA GTAGAAGGGA TTTTTTTCGA AAAAGTTTGC TAGTAGTTTT GTCTGCTGAA
GTTTCTTAAA TTTGCATTGT TAAAAGTTTG AGCTATCTTG CGATTTCATC GAAGGAAC
 
Protein sequence
MKYIQTDQIL EIPEGVHVNI NARSIKVTGP RGELTKDLKH IDVTFTKVNN RAIKITVHNG 
DRKHVAALRT VKSLIANLIT GVTKGYKYKL RYVYAHFPIN VNIVEKDGDK FVEIRNFLGE
KRVRNVKIFE GVTIEQSANQ KDELVVSGNS LEAVSQNAAD IQQICRVRNK DIRKFLDGIY
VSERGTIVEE L