| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_79863 |
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| Symbol | CDC43 |
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| ID | 4840989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 402997 |
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| End bp | 405031 |
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| Gene Length | 2035 bp |
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| Protein Length | 382 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640392304 |
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| Product | geranylgeranyltransferase beta subunit |
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| Protein accession | XP_001386468 |
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| Protein GI | 150866764 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5029] Prenyltransferase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TAATACAAAT ATTATGGTAG ATAAAGGGCT CACATACCAT GGAGCTAGGA TTAACTTACG
AATTATCCAA AGCCTTCATG AGGCGAAGCT GATGAATGAG CTGGAAGTGA CAAGAAGTGG
AATTTATGGA AAGCTGTGTG CACGAAATTC CTGGTCGCCC GGAAATCTGG CTACCACCGG
TCAGTTCTAT TGGAACAAAG CGTCACAGGA ATCCGTACAG ACAAGTTCCA CACCGCAGAA
GCGTGAAAGA CAAGTTGGCG TACTGTTCAC TTGCAATTCC ACGTCGCGGC ATATGAATAC
AGAGAAATGG GTCATGTGAC GTATGCATGT TGCTGCCGTT GGCAAAACTG CTATGGATTT
GAAATTTATC AGGCAGAATA CTGGAATTCG ACTCTCTAGT CACAACTTTA TTTCAGACCG
GGCTGAGGCA CGGTCTCAAA CATAAACATA TGGCCTATTT CAATGAACTG CCGAAGATTG
AACAGAAGAA GCATTTGAGA AATGCATAAA TTTGAGAAAG AGTATATGCA GTCCTACATG
TCCATAATAA GCGAGCGGAT AATTTGTATG GCGCATTAGA GAACCCACAA TTGATCTTTT
ATAGGCAGTT TTGGTTTCTG AATAATTCCA GCTGACAGAT CGAGATTTTA AAGGTAGAGA
AGTCAATGGG CGAACAGAGA GAATTTCTTA CCGAAAAGCA TGCGAAGTTC TTCCAGCGAT
GTTTGCTTTT GCTCCCAGCC AAACTCCAAG GAGAAGATGC CAATAGGCTC TCGTTCATAT
ACTTCTGCCT TCATGGGTTG GGGCTTCTCA AACAATTGAA ATACACGAAA GAAGAGCTAC
AGTCATACAG TGACTTCATA TATAAAGACT ACTTACTTGA AAACGACGAC TTTTCAGCAT
TTAGAGCTAC TCCATACTTT AAAGGTCTGT CGAAGTATGA TCTTCCCAAT CTTTCCTCCA
CTCTTTTTGC ATTGCTCAAT CTTCTCATTC TTGAGTCTGA CTATTCCAAA GTGTTGGACA
ACCACAAAGT CATGAAGTTC TTACAATTGA GCCAGATCAA GGAAGGAGAG AATAAAGGCT
CTTTTGCTCC TACACTTCGG AATGGCGACA ACGGAGAATA CGTCCAGTTT GGAGAAACAG
ATGTACGATT ATGCTATATA GCTGCTAGCA TACGACACCT TGTGAAGTAT GATACGCTCG
GAGAGGAAGA GCGGAAGAAT GATATAGACA CCAAGGCATT GACGGATTTC ATCCTTCTGA
GAATTGATTA CCAGGGAGGA CTAAGTTTCA CGAAGCATGT CGAAAGCCAT CTTGGGTTTT
CGTACTGTGG AATAGCATGT TTAAAGCTTT TGGGATACGA ATTTGGCTCA GATTTCCAAA
AGACAGTCAA TTGGCTTGTT CACAGACAAG TGGATTTTCC ACCGCAACTC TACGATTTTG
AATACGAATA CCACGAAGAA GAAGACATAG GAGCATTCAA TGGGCGCGAA AACAAGTTTG
GCGATACCTG CTATTCGTGG TGGTGTACTG CAAGTTTGGC ATTGATAAGC ACTAGTCATC
TCAAGCTTGT AGACTTGGAT AAAGCCCAGG AGTATTTGCT CAACAATGTA CAAAACGGCA
TGGTTGGCGG TTTTAGTAAG GATCCAAGTG CAACTCCAGA TCCTTTCCAC AGTTTCCTAG
GAATTGCCAG TCTAGCACTC TGGCGCCAAA ACGAAGCTGG CGATTCGTGT TTGCCCGACC
TTGATGGTGT CGACGAAGCT TTGGTGATTA CAAGTGCCCT GAAGAAGTTC TTTGAAGAGC
AAGTTAATTA CTGACGGTTG AGGGCAGGGA GATAAGTTCA GAGATTTGAA TGATATAAAG
TTACTGAAAA GAGGATGACA AACAATTATC ATCATTAAGC ATTTATCGTC TGTAAAGAAG
CATATTAAAA TTGCAATCGT AGGATATCTT CTACGGAATG CAACTGAAGG TAGATATCTT
CGGCATATTT ACTAGTAGAC ATCATCTTAT AGTATAGTGA ATATCCCTTT CTTAG
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| Protein sequence | MGEQREFLTE KHAKFFQRCL LLLPAKLQGE DANRLSFIYF CLHGLGLLKQ LKYTKEELQS
YSDFIYKDYL LENDDFSAFR ATPYFKGSSK YDLPNLSSTL FALLNLLILE SDYSKVLDNH
KVMKFLQLSQ IKEGENKGSF APTLRNGDNG EYVQFGETDV RLCYIAASIR HLVKYDTLGE
EERKNDIDTK ALTDFILSRI DYQGGLSFTK HVESHLGFSY CGIACLKLLG YEFGSDFQKT
VNWLVHRQVD FPPQLYDFEY EYHEEEDIGA FNGRENKFGD TCYSWWCTAS LALISTSHLK
LVDLDKAQEY LLNNVQNGMV GGFSKDPSAT PDPFHSFLGI ASLALWRQNE AGDSCLPDLD
GVDEALVITS ASKKFFEEQV NY
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