Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_74130 |
Symbol | GLY1 |
ID | 4841071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 396387 |
End bp | 397591 |
Gene Length | 1205 bp |
Protein Length | 369 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640392386 |
Product | threonine aldolase |
Protein accession | XP_001386466 |
Protein GI | 126139888 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TAACATACCC TAATGGACTT CTCAACTTAT ACCGCCCAGA GTCCGGCCCA TAACGAATTC CGTAGTGACA CTTTCACCAC GCCAACGGCT TCCATGATCC AGGCATTGGC CAATGCAACC TTGGGAGACG CCGTCTATAA CGAAGACGAA TCTACCATTG CCTTGGAGAA AAAGGTAGCC GATTTGGCTG GAAAAGAAGC CGGCTTGTAT TGTGTTAGTG GAACTCTCTC CAACCAAATT GCCCTTAGAA CAAACCTCAT CCAGCCTCCA TTCAGCATCT TGTGTGACCA CAGGGGCCAT GTCTATGTCC ACGAAGCGGG TGGATTGTCC ACCTTATCAC AGGCTATGGT TCAGCCGATC GTGGCCAAGA ATGGACATCA TTTGACGTTG GAAGATGACA TTTTGCCCAA CTTCATTCCT GACGACGGAG AAATCCATGG AGCTCCAACG AAGGTCATTT CTTTGGAAAA CACCTTACAT GGTATGATTT TCCCCTTGGA TGAAATCAAG AAAATCTCTA ACTTCTGCAA GAAGAACGAC GTAAAATTGC ATCTTGACGG TGCCAGATTG TGGAATGCGT CTGTTGCCAC TGGAATTTCT CTCAAAGAAT ACTGTTCATA TTTCGACAGT GTCTCATTAT GTCTTTCCAA GACTTTGGGT GCTCCTGTTG GCTCTGTTCT AGTGTCAACC AGAAAATTTG TAAACAAAGC TAACCACTTT AAGAAACAAA ACGGTGGTGG AATCAGACAA AGTGGTTTGT TGGCTGTAAT GGCCATCACA GCCATCGACG AGAACTTGCC TAAATTGCAA AAGACCCATG AAAGAGCCAA AGAGTTAGGT GAATTGTGTG ACAAGAATGG AATCTACTTG GAACATCCCG TCGAAACAAA CTTCGTGTTT ATCGACACGA AGAAAAACAA ATGGAACCCG GAGTCCATAA AGACATTAGC AGAGAAGCAC GGAATTAAGT TTTACGGAGG AAGAATATCT TTCCACTATC AAGTTTCTGA CGAAAGCTTT GAAGCCGTTA AGAAATTTGT ATTGGAAACG CAGGAAGATG CTAAGAAAAA CCCATACGAC GGCGGCGATC AGGTCAGATT TTACAGTAAT ATCGAAGAGT GATTGCAAAG TAAGATGATT TACATACCCT ATAATATGTA TAATTAACTA AGTTATATAG ACATTATATA CGTATATTAA TATGT
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Protein sequence | MDFSTYTAQS PAHNEFRSDT FTTPTASMIQ ALANATLGDA VYNEDESTIA LEKKVADLAG KEAGLYCVSG TLSNQIALRT NLIQPPFSIL CDHRGHVYVH EAGGLSTLSQ AMVQPIVAKN GHHLTLEDDI LPNFIPDDGE IHGAPTKVIS LENTLHGMIF PLDEIKKISN FCKKNDVKLH LDGARLWNAS VATGISLKEY CSYFDSVSLC LSKTLGAPVG SVLVSTRKFV NKANHFKKQN GGGIRQSGLL AVMAITAIDE NLPKLQKTHE RAKELGELCD KNGIYLEHPV ETNFVFIDTK KNKWNPESIK TLAEKHGIKF YGGRISFHYQ VSDESFEAVK KFVLETQEDA KKNPYDGGDQ VRFYSNIEE
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