| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64707 |
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| Symbol | PSH1 |
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| ID | 4840985 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 210840 |
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| End bp | 211919 |
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| Gene Length | 1080 bp |
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| Protein Length | 301 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640392300 |
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| Product | associated with histones/Spt16/Pob3 |
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| Protein accession | XP_001386438 |
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| Protein GI | 150866744 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5432] RING-finger-containing E3 ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGAGA TCGAAGAGGG ACAGAAGGTG TGGAGTGGTA TGGTAAGTAT TGGAAGTTAT
AAGTTCAAAA TTTTTTGAAC CCATCGCTAC GACTCTGAAT CTTAATTCTT AAATCAAAAT
TTGGAATCAA TTTTCATGAG TGTATATTTT TCTCGTATCC CGTACTAACA TTGTCAGGAC
CACGAACTTA CAAGCAATCT TCTCCTGAAG ATCACTGCAA ACATAGAATG CACCATCTGC
AACGAGACAA TGCACGTGCC GTTCACTGTA GAATGTGGCC ATTCGTTCTG CTACGACTGT
TTGCACACCT GGTTTGAGAA CAAGATCAAC TGTCCCACCT GTAGACACAA CATTGAAAAC
AAGCCGCTGT TGAACTTGCA ACTTAAGGAG ATATCAAAGG CGATAACGGA TATCATAATT
GACACTTGCG TAGTTGAAAG CGAAAAGACC AAGTTGGTAG AGCATCGCGA TGGCTGCTGG
AAAGCATACA ACTTTGATGT GAAACATAAA CGAATCTTTG GTGATTTGTT CAAAACAGCA
CTCACACTTA TAGACAACTC CGACGGCGTT CCTCGGTGTG GCAACTGCCA CTGGGAAGCT
CATGGTAGTG TGTGCTTGCA CTGTGGAACT CGGTTTAGAG TGCCTCAGGA AGACGAGTAT
TATGACTCTC CAGAGGGGGA TGCCTATAAC GAAGATGCTG ATGAGCACTA CTTGCATGGC
TCACACGACG AATACGATAG CGCGGACAGC TTTGTTGATA CCCGTAGTGT AAGCGAGATC
AACCGCGACG TGCGGCTAGA TGACGACGAC GACATCCTCT CATCAGACAA TGAAGTCCAG
AGTACGACAT ACGATGATTG GAACGGATTC CATGGCGACA ATGCAGCAAG TCCAATAATA
TTGAGTGGAG TCGACGACGA CGATGATGAT GATGACGATG ATGTACAGTA CTACGATTCA
GACGATATAC GAGATGCCTT GGACGAGTTT CACGACGCTC AATTGGAGCA AGTAGGCGAC
GACGACGATA TCAGATCCCA CAGACATCGA GTGATTCACA TAAGTGACGA AGAGGACTAA
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| Protein sequence | MGEIEEGQKV WSGMDHELTS NLLSKITANI ECTICNETMH VPFTVECGHS FCYDCLHTWF
ENKINCPTCR HNIENKPSLN LQLKEISKAI TDIIIDTCVV ESEKTKLVEH RDGCWKAYNF
DVKHKRIFGD LFKTALTLID NSDGVPRCGN CHWEAHGSVC LHCGTRFRVP QEDEYYDSPE
GDAYNEDADE HYLHGSHDEY DSADSFVDTR SVSEINRDVR LDDDDDILSS DNEVQSTTYD
DWNGFHGDNA ASPIILSGYY DSDDIRDALD EFHDAQLEQV GDDDDIRSHR HRVIHISDEE
D
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