| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64368 |
|---|
| Symbol | HEM13 |
|---|
| ID | 4840979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | + |
|---|
| Start bp | 182308 |
|---|
| End bp | 183279 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640392294 |
|---|
| Product | Oxygen-repressed protein |
|---|
| Protein accession | XP_001386432 |
|---|
| Protein GI | 126139820 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.956921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCGT ATGAACAGAT CCACGACAAG TCGTTTTCCA TCAAGGAGCG GATGGAAGCA
TTGGTGAGAC AAAAGCAGAA GGAAATCACT GAGGCCATCT CCAAGTTAGA CACTGTAGAC
TTCCACACCG ACACCTGGAC CAGAGGTGAC AATGGAGGGG GAGGCCAGTC GATGGTGATT
CAGAATGGTA CCACTTTCGA AAAAGGAGGG GTCAACATTT CTGTGGTACA TGGTAAGCTT
CCTCCTGCAG CCGTGGCCAG GATGAAGGCC GACCACGCGA ACTTGAAGGG TTCAGATGAT
GATGGCTCTG TCAACTTTTT TGCTTGTGGT TTGTCCTTGG TGATCCACCC TATCAATCCT
CATGCTCCTA CGACCCATGC CAACTACAGA TACTTCGAGA CTTCGGATCC AGTATCGGGC
GAGACCCAGG CCTGGTGGTT TGGAGGAGGC GCTGACTTGA CTCCCTCGTA CTTGTACGAA
GAAGATGCCA AACACTTTCA CCAAGTCCAT AAGGACACCT TGGACAAGTA CGATAAGGAG
TTGTATCCAA AGTACAAAAA ATGGTGCGAC GAGTATTTCT TCATCAAGCA CAGAAACGAG
ACTAGAGGTA TCGGAGGTAT TTTCTTCGAC GACTTGGACT CCAAACCTGC TGATGACATT
TTGCGTATCA TAGAGTCGTC GTTCGATGCC TTCTTAGCTG CCTATGTTCC CATCGTAGAA
AAGAGAAAGG ACACTCCCTA CACTCCAGAA CAAAAGCAAT GGCAACAAAT CAGAAGAGGC
AGATACGTAG AGTTCAACTT GGTCTTGGAT AGAGGTACCC AGTTTGGTTT GCAGACACCA
GGTTCTCGTG TCGAGAGTAT CTTGATGTCG TTGCCAGCTA CTGCCAGTTG GGTCTATGAC
CACCATCCTG AGGCAGGCAG CGAAGAGGAG AAGTTGATCA AAGTGTTGCA GAACCCAGTC
GAATGGGTTT AA
|
|---|
| Protein sequence | MVSYEQIHDK SFSIKERMEA LVRQKQKEIT EAISKLDTVD FHTDTWTRGD NGGGGQSMVI
QNGTTFEKGG VNISVVHGKL PPAAVARMKA DHANLKGSDD DGSVNFFACG LSLVIHPINP
HAPTTHANYR YFETSDPVSG ETQAWWFGGG ADLTPSYLYE EDAKHFHQVH KDTLDKYDKE
LYPKYKKWCD EYFFIKHRNE TRGIGGIFFD DLDSKPADDI LRIIESSFDA FLAAYVPIVE
KRKDTPYTPE QKQWQQIRRG RYVEFNLVLD RGTQFGLQTP GSRVESILMS LPATASWVYD
HHPEAGSEEE KLIKVLQNPV EWV
|
|---|
| |