| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64252 |
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| Symbol | |
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| ID | 4841156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 604400 |
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| End bp | 604966 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640392471 |
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| Product | predicted protein |
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| Protein accession | XP_001386516 |
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| Protein GI | 150866798 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5143] Synaptobrevin/VAMP-like protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.823304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.145167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCAGA AGAAAAAGTG TAAGATTCTC ATCAGTAGAA TGACACCCAA CTCCGAGCCT
CAGGCTACAA TTGAATCTGG GGACTATAAC ATCCACTACT TGATCGCAAG CCTGATCATA
TACATTTGCA TTAGTGAAAA GTCATACCCC AGGAAGCTTG CATTCTCATA CTTGCAAGAA
ATATCGCATG AGTTCCAGAA TTCGCATGGA ACAGATGCTT TATCGAACTC AGCCAGACCT
TTTGGATTCT CTTCGTTTGA TAATTTCTTG AGCAAAACTA AAAAAATCTA CCAAGATCAG
AGAGCACAAT CAAATTTGGA CAGATTGAAC AACGACTTGG CAGATGTCAA GAAAGTCATG
ACAAAGAACA TCGAAGACTT GTTATATAGA GGCGACTCGT TGGACAAGAT GAGTGACTTG
TCGTCGAGCT TGAAGAGTGA TTCGTTGAAG TACAGAAGAA GAGCACAAAG AATCAACTTA
GAGGCCATGA TCAGACAGTA CATCCCCATT GTTGGAGCTG GGTTGATCTT TGTGTTTTTG
ATATGGTACA TGTTCCTCCG TCGTTAA
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| Protein sequence | MDQKKKCKIL ISRMTPNSEP QATIESGDYN IHYLIASSII YICISEKSYP RKLAFSYLQE
ISHEFQNSHG TDALSNSARP FGFSSFDNFL SKTKKIYQDQ RAQSNLDRLN NDLADVKKVM
TKNIEDLLYR GDSLDKMSDL SSSLKSDSLK YRRRAQRINL EAMIRQYIPI VGAGLIFVFL
IWYMFLRR
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