| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63933 |
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| Symbol | ISM1 |
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| ID | 4841139 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 699184 |
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| End bp | 702246 |
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| Gene Length | 3063 bp |
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| Protein Length | 983 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640392454 |
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| Product | isoleucine-tRNA ligase |
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| Protein accession | XP_001386726 |
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| Protein GI | 150866954 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.946751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.211446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGCT GTATAGGGCT GGTGAGACTG CTCTCAACAG GTCCTCGTTG TTTGCAGAAA
GTCAACTATT CCAATACTCT CCATCTCCCT AAAACCAGCT TTGGACCCAA GATCCCAAAA
AACGAGGCTA GGGATGAACT TATAAAGACT ACAAGTCAAG ACTTGTATGA GTGGCAAGTT
AAGAATAAAG AGAACAGACC CTCTTTCACA CTACACGATG GCCCTCCTTA TGCGAATGGG
GATTTACACT TGGGACATGC CCTTAATAAG ATTCTCAAGG ACATCATCAA TAGATTTGAG
TTGATCCATA ATAATTCCGT AATCAACTAT CGCCCGGGGT GGGATTGTCA CGGTCTTCCA
ATTGAAATGA AGGCAACGAA CTTGGAGGCG GAAATTAAGA AGAATTTAGA AAAGAACAAG
AAAAAGAAAA AAATCAACAA CAAGAACAAA CATAATGAAC CAGAACCAAC TTTGGAATCC
GCAACTAAAC TTCTGGCATC TGAAATCCGT GCAGCTTGTA GGCAATTGGC TAACAAAGAA
ATTGACAGTC AGCGTAACCA ATTCAAGGAG TTTGCCATAA TGGCAGATTT TGATAATCCA
TATATCACGA TGTCTCATGA TTATGAGATC AACCAGCTTC GTGTGTTTAA AAAGCTCATG
GAAAACGGAT TGCTTTCCAG ACAGTTGAAA CCAGTATGGT GGGGATGTGA AACTGAAACA
GCTTTAGCTG AGGCGGAGTT GGAATACAAT AACGACCACA AGTCTGTAGC TATACATGTA
AAATTTCCAG TAGTGTCAAG TGTGATATAT CAGACGTTGC GTGATAATTT CAAAATTGGG
GTAAACGAAC AAGACCTCAA CTTGAAGTTA CTCATATGGA CCTCGACTCC ATGGACAATT
CCAGCAAATA GAGCTGTATG CGTGAACAAC GATCTTGATT ACACTTTAGT GCACAATAAG
ATAACCAATG AATATTTGTT TGTTGGAGTG CCATTGGTTA ATGAGGTTTT GGCATTGAAT
GATAATTTCG AAAGTGTTGG AGAGTCAGTT ATATTCAGAG GCAATGATTT AGTTGGCTTG
GAATACATCA ACCCTGCTTC AAAGGATGGT GTACATCATC CAGTTATCCA CGGATCTCAT
GTTGTTTCTT CAGCTGGTTC TGGACTTGTT CATACCGCTC CAGCTCATGG TGGAGAAGAT
TTTATTATTG GCAAGAACCA TGGTTTAGAC GTAAGATCTT CAGTAAATGG ACAGGGAAGA
TATATTGCTG ACAATATTCC TGTTGGTTTC CACTCATTGG CTAAACATAA GGTAACAGAT
TCAGAAACAA TCAGAAAATG TATTGGCATA TTAGACGAGA ATGGTATGAT TTTCAATATC
AACAAAACTT TCAAGCACTC CTATCCCTAC GATTGGAGAT CAAAGACTCC AGTCATCCAG
AGATCCACGC CACAATGGTT TGTCAATGTA GAAAAGATTA AACCTACGGC AATAGAAGCT
CTCGAAAAGG TAAAATTCTA TCCTGAGTCA GGCAAGAATA GATTGCCACT GTTCATCAGA
AATAGAAACG AATGGTGCAT ATCAAGACAA AGAACATGGG GTGTACCATT GCCAATAGTG
TACAATAGAA ATTCAGGCGA ACCCGTAGAA GATATCGAAA CAGTTGACTA CATTATTCAT
AGAATGGATG AATTTGGTAC TGATGAATGG TTTTCTTCAG AAGATGATAT TTCAAGATGG
TTGCCCGAAG AATACAAACT GAGCGGCAAA GAATATGTCA AGGGACAAGA TACTATGGAT
GTGTGGTTTG ATTCAGGAAC ATCCTGGACT ACATTGAACA AGGATATCGA ATCTTCCTTC
AGATCTGAAA CTCCATTGGC CAACATCTAC CTTGAAGGAA GTGACCAACA TAGAGGCTGG
TTCCAATCAT CCTTATTGAA CAAGATCATT GCCTCTGGTG TTAATGGCAA TGATTTCTTG
CCCGTCGCTC CATTCACCAA GATCATAACG CACGGATTCA CATTGGATAG CAAAAATGAG
AAGATGTCAA AATCCAAAGG AAATATCATT TCTCCCAGGC ATGCCATTGA AGGTGGAGGA
AAACCACTTT TACCAGCATT AGGTACCGAC GGTTTGAGAT TATGGGTTGC GTCTTCTAAC
TATAATGCCG ATGTAAGTGT TGGAAGTGAA GTGTTAAGCA GAGTCTTTGA GAATATGAAG
AAATTGAGAG TGACTTTCAA GTACTTGTTA GGCAATCTTA ATGACTTTAG AGAGCCAGTG
GACTATAATA ATTTAAACCC ATTGGATAAG TACGCGCTTT CTAAGCTTTA CAAGTTGGAA
ACGTCTTGCA TTGAACATTA TAAGGAGCAC AACTTTTCCA GAGTTGTGAG TGAAGTCAAC
CACCATATGA ATGTGATCTT GAGTTCGTTA TATTTCGACA TTTCGAAAGA CTGCCTTTAC
ACTGACTCTA AGAATTCTGT GAGACGAAGA AGTATTCAAA CCGTATTGAA AGAAATCTTA
AGAGTCTACA TTGGTTTACT TGCTCCCATT CAACCCATAT TGACACAGGA AGTATGGGAA
GAGTACCGTA GGTTCTTCGA CGTCAAGGAG AGTTCTCCAT TTATGGTGGG AGGCTGGCAC
AATTTCTACA AGTTGCAAGA CCAATTCTTG AATGAGCAAA TCGAATCTGA GTTCCAGTTG
ATTTGGGAGC TCAGAGACCA AGTCTATAAG CAAATGGAAC AGCTCAGACT CGACGGCATC
TACAAGAACA AATTGGAAAC TCAGGTAAAC ATTGCATTCA ACGGAGAGAA GACCAAGTTA
GAGGACATTT TACGCGCACA CGCATTGTTC TTGGACGATT ACTTCTTAGT CTCGAAAGCT
ACAGTAGGAC AATTGGAAGC TGATCCAAAA TACGAGAGCA AAACCACGGT CGAAGTGAAC
GGCGAATCTG TAAATATCCA AATCAGCCCA TCTCCTGGAG CCAAATGTCC CAGGTGCTGG
AAGTTCACTT CTGTAGTGGA GGACAAATTG TGCCAGAAGT GTGACACAGT AGTGAACCAC
TAA
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| Protein sequence | MLRCIGSVRS LSTGPRCLQK VNYSNTLHLP KTSFGPKIPK NEARDELIKT TSQDLYEWQV
KNKENRPSFT LHDGPPYANG DLHLGHALNK ILKDIINRFE LIHNNSVINY RPGWDCHEPT
LESATKLSAS EIRAACRQLA NKEIDSQRNQ FKEFAIMADF DNPYITMSHD YEINQLRVFK
KLMENGLLSR QLKPVWWGCE TETALAEAEL EYNNDHKSVA IHVKFPVVSS VIYQTLRDNF
KIGVNEQDLN LKLLIWTSTP WTIPANRAVC VNNDLDYTLV HNKITNEYLF VGVPLVNEVL
ALNDNFESVG ESVIFRGNDL VGLEYINPAS KDGVHHPVIH GSHVVSSAGS GLVHTAPAHG
GEDFIIGKNH GLDVRSSVNG QGRYIADNIP VGFHSLAKHK VTDSETIRKC IGILDENGMI
FNINKTFKHS YPYDWRSKTP VIQRSTPQWF VNVEKIKPTA IEALEKVKFY PESGKNRLPS
FIRNRNEWCI SRQRTWGVPL PIVYNRNSGE PVEDIETVDY IIHRMDEFGT DEWFSSEDDI
SRWLPEEYKS SGKEYVKGQD TMDVWFDSGT SWTTLNKDIE SSFRSETPLA NIYLEGSDQH
RGWFQSSLLN KIIASGVNGN DFLPVAPFTK IITHGFTLDS KNEKMSKSKG NIISPRHAIE
GGGKPLLPAL GTDGLRLWVA SSNYNADVSV GSEVLSRVFE NMKKLRVTFK YLLGNLNDFR
EPVDYNNLNP LDKYALSKLY KLETSCIEHY KEHNFSRVVS EVNHHMNVIL SSLYFDISKD
CLYTDSKNSV RRRSIQTVLK EILRVYIGLL APIQPILTQE VWEEYRRFFD VKESSPFMVG
GWHNFYKLQD QFLNEQIESE FQLIWELRDQ VYKQMEQLRL DGIYKNKLET QVNIAFNGEK
TKLEDILRAH ALFLDDYFLV SKATVGQLEA DPKYESKTTV EVNGESVNIQ ISPSPGAKCP
RCWKFTSVVE DKLCQKCDTV VNH
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