| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50761 |
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| Symbol | RPE1 |
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| ID | 4840854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 859708 |
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| End bp | 860406 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 12 |
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| GC content | 49% |
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| IMG OID | 640392169 |
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| Product | D-ribulose-5-phosphate 3- epimerase |
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| Protein accession | XP_001386579 |
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| Protein GI | 150866849 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCCAGC CTATCATCTC TCCGTCCATC TTAGCCTCTG ATTTTGCCAA CTTGGGCTCC
CATTGCAAGT GTATCGTCAA TGGTGGTGCG GAGTGGCTCC ATCTTGATGT CATGGACGGT
CACTTTGTTC CCAACATCTC TCTTGGAGCA CCCATCATTG CCAGCTTGAG AAAGCAGTTC
CCCAGATCAG ACCCTAATCC AGTCTTTTTC GACTGCCACA TGATGGTGTC CAACCCAGAA
CAGTGGATCG AGGACATAGC CAAGGCTGGA GGCGATGGTT ATACTTTCCA TTTTGAAGCT
ACAGACGATG CATTGAGAAC TATCAAGAAG GTTAAAGCTG CTGGCATGAA GGTGGGTGTA
TCTGTCAAGC CAAAGACTCC AGTGGAAGTG TTATTTCCTA TTGTAGAGGA AATCGACTTG
GCTCTTGTCA TGACTGTAGA ACCAGGCTTT GGCGGCCAGA AGTTCATGCC TGAGATGATG
GCCAAAGTTG AGATCTTAAG AAACAAGTAC CCTGACTTGA ACATTGAAGT GGATGGAGGC
TTGGCTAAAG ACACTATAGA TGCTGCTGCT AAGGCCGGCG CCAATGTCAT TGTAGGTGGT
ACTTCTGTCT TCGGTGCAGA AAACCCAGCA GAGGTCATTG ACTTCTTGAG ACTGTCTGTC
GCCACCAGCT TGACAGCCAA GGGCTTGCTC ACTAAGTAG
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| Protein sequence | MVQPIISPSI LASDFANLGS HCKCIVNGGA EWLHLDVMDG HFVPNISLGA PIIASLRKQF
PRSDPNPVFF DCHMMVSNPE QWIEDIAKAG GDGYTFHFEA TDDALRTIKK VKAAGMKVGV
SVKPKTPVEV LFPIVEEIDL ALVMTVEPGF GGQKFMPEMM AKVEILRNKY PDLNIEVDGG
LAKDTIDAAA KAGANVIVGG TSVFGAENPA EVIDFLRSSV ATSLTAKGLL TK
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