| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50606 |
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| Symbol | SGE1.2 |
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| ID | 4840829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 17184 |
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| End bp | 18602 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640392144 |
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| Product | hypothetical protein |
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| Protein accession | XP_001386606 |
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| Protein GI | 150866868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.862046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | AACTTGGCTT CGTGGATTAC TACTTCTTAT TTAATCACTT CAACTGCATT TCAGCCTTTG
TATGGCTCCT TTTCGGATGT TATTGGTAGA AGGAAATGCT GCTTCTTTGC TCTGGCGTCA
TTCGCACTTG GTTGTCTAGG TTGCTCTATG GCAACTGATA TCATCACTTT CAATTTGATG
AGAGCCTTAA CAGGTATCGG AGGTGGAGGG TTAATCACAT TATCTACAAT CGTCAACTCT
GATGTCATCA CTAAGAGGAA GAGAGGATTA TTTCAAGCCG TGCAGAATTT GTTGCTAGGA
TTTGGTGCAG TGTGTGGTGC ATCTTTTGGT GGTTCCATTG CTTCATATTT TGGTTGGAGA
TGGTGTTTCA TCTTTCAAGT GTTTCCTTCC ATTTGGAGTC TTATAATTGG ATACAAGTAT
ATCACAAATC AACCTGGATT TGATGAATCC CAGCAGCATT TATCCAGCTC TGTGTTAGAA
AGAATAGACT ACAAGGGTTC AATTATCCTA GTGAGTGCAC TTACATGTCA ACTATTTGTT
CTCACATTAG GAGGAAATGA ATTACTGTGG CTGGACTCGA GATTAATAAC ACTTGCAATT
TTAGGAGCAA CATTATTATT CTACTTCATC TATATCGAAC TTCATACCAA AGCTAATCCA
ATCATTCCCG TAAGGAGATT CAATAGCTTA TTCACAGTCT TGCTACTTGC CCAGAACTTC
TTATTGGGAT TATGTGCTTA TGCTTATCTT TTTGCATTGC CATTATTATT TCAGATCGTC
TTGGGCGACA CTCCGTCAAA AGCAGGGTTG AGGTTGGCAG TTCCTTCTTT ATCTACTCCT
ATTGGTAGTG TGATAACTGG AGTAATGATG AATAAATATG GAGTGTTAAA AGGATTGTTG
TACGTTGGAA CTATGACAAT GGCAATTGGA AACTTTTTGA CCTTGTTAGT CAGTCCCAGT
ACTCCTAGTT GGCTCTTGAA TATTTTGCTA ATGCCAGCAA ATATCGGTCA AGGAATGGCA
TACCCGAGCT CGCTATTTAC ATTCATATTT GCTTACGGAA CAACTCACCA GGCAACTTCT
ACTTCGACAA TATATTTACT GAGAAGCATA GGGGGAGTAT TTGGTGTATC CAGTGTTTCA
GCGATTATCC AAGCATATTT GAAATTCAAA GTGAGAAAGG ATTTGAGTGC CCTACCAGAA
TTATCCCATA AAGAAATCCA TAAGATTGTT ATTGCAATTT CAAAATCTTC TGATGCCATA
TACAAGTACC CTGACACCAT CAAGTCTATT ATTCTCCTTG ATTACGAAAG AGCCATAAGA
CTTGCACAAT TGTTTTCCAG TATTTGTTGT GCTACAGCCT TTATTCTCTG TTTGATGAGA
GATATAACAA GATCAAAGCC AGACACATCT GTTGCATGA
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| Protein sequence | NLASWITTSY LITSTAFQPL YGSFSDVIGR RKCCFFASAS FALGCLGCSM ATDIITFNLM
RALTGIGGGG LITLSTIVNS DVITKRKRGL FQAVQNLLLG FGAVCGASFG GSIASYFGWR
WCFIFQVFPS IWSLIIGYKY ITNQPGFDES QQHLSSSVLE RIDYKGSIIL VSALTCQLFV
LTLGGNELSW SDSRLITLAI LGATLLFYFI YIELHTKANP IIPVRRFNSL FTVLLLAQNF
LLGLCAYAYL FALPLLFQIV LGDTPSKAGL RLAVPSLSTP IGSVITGVMM NKYGVLKGLL
YVGTMTMAIG NFLTLLVSPS TPSWLLNILL MPANIGQGMA YPSSLFTFIF AYGTTHQATS
TSTIYLSRSI GGVFGVSSVS AIIQAYLKFK VRKDLSALPE LSHKEIHKIV IAISKSSDAI
YKYPDTIKSI ILLDYERAIR LAQLFSSICC ATAFILCLMR DITRSKPDTS VA
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