Gene PICST_50569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50569 
SymbolFTH2 
ID4840968 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp734415 
End bp735611 
Gene Length1197 bp 
Protein Length383 aa 
Translation table12 
GC content41% 
IMG OID640392283 
Productpotential iron permease membrane protein 
Protein accessionXP_001386732 
Protein GI150866957 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0122475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGT TCGAAGACTA TTTCTCGATT CAGATTTTCT TCATCATTCT CAGAGAAACC 
TTGGAGACAG CGATTATCAT ATCGGTACTT CTTTCGTTTA TCAACCAAAG ATCGCATACA
CATAACAGTC AAATAAGCGA ACAACAGGAT GAACATGACG TGTCTCATCT TGAAAAAGTA
CAGGGAAAGT TGCGATTTCA GGTCTGGTTT GGAGCCATTC TTGGTTTGAC CATTTGTCTT
TTCATTGGGT TGGTCTTTGT AACCAGCTTC TACTTGATAG GTAAAGACTA CTGGTCGTAT
ACTGAACGTC TTTGGGAAGG AGTATTTTCA TTGCTTTCCA GTTTAATCAT TACCATTATG
GGTGTAGGCT TGCTTAGAAT AAATAAGGTG ATGAAGGTGA AATGGTGGGT TAAATTGGGT
GATGTCTACA ATAGCTCAGA TAACCATATC GAGGATGCTG AAGGAGAAGA AGAAATTGCA
AAATTAGGAG ATGACAGCAG CCCTGAAGAT AGTCTTCTTG GTGGTTCCAG TGAAGATACA
AGAGTGGCAG GTTCTTCGGC AGCCTTGCGG AGACAAAAAA CTGACGGAAA GAAGCAGTCG
TTTTCCAAAA AGTACTTTTT GGCCATTTTA CCGTTGATAA CCACTTTGAG AGAAGGCTTG
GAAGCAGTTG TTTTCATAGG TGGTATTGGT ATGTCGCTGC CTCCTACTTC TATTCCATTG
TCTATTTTGG CTGGTGTTTC ATTCGGGTCA CTTGTAGGCT ATCTTTTGTA CAAGGGAGGT
AACAAGATGT CCTTGCAGTA CTTTTTGATA TGTCTGACGT GTTTTCTTTA TATTGTCTCT
GCTGGTTTGA TGAGTAGAGG TGTGTGGTTC TTGGAGCTTG AACACTTTGT AAGAATGTGC
GAAGGCACCG ACCCAAGTGA AACTGGTAGT GGCCCAGGCT CTTATGACAT TTCCAAGAGT
GTGTGGCACG TTAACTGTTG TAACGGGTTG AAAGATGGAT GGTGGATGGT CTTTAATGCC
ATTTTTGGCT GGACTAACTC CGCTACTTAC GGAAGTGTGG CCACATACAT TTCGTACTGG
CTTTTGGTTA TCATTTGGTT GGAAGTCAAA TTGTACGAAG AGAGAGAAGG TGTTCTTCCT
CTTTTGCCTA TTAGATGGCA ATTAAGGAGA ATAAAAAAGA AGGTCAAGAT GTACGAA
 
Protein sequence
MIEFEDYFSI QIFFIILRET LETAIIISVL LSFINQRSHT HNSQISEQQD EHDVSHLEKV 
QGKLRFQVWF GAILGLTICL FIGLVFVTSF YLIGKDYWSY TERLWEGVFS LLSSLIITIM
GVGLLRINKV MKVKWWVKLG DVYNSSDNHI EDAEGEEEIA KLGDDSSPED SLLGGSSEDT
RKQSFSKKYF LAILPLITTL REGLEAVVFI GGIGMSSPPT SIPLSILAGV SFGSLVGYLL
YKGGNKMSLQ YFLICSTCFL YIVSAGLMSR GVWFLELEHF VRMCEGTDPS ETGSGPGSYD
ISKSVWHVNC CNGLKDGWWM VFNAIFGWTN SATYGSVATY ISYWLLVIIW LEVKLYEERE
GVLPLLPIRW QLRRIKKKVK MYE