| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50417 |
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| Symbol | URA3 |
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| ID | 4840866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 357829 |
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| End bp | 358632 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640392181 |
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| Product | Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase) (PYRF) |
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| Protein accession | XP_001386655 |
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| Protein GI | 126140266 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.571106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAACG TCCAAACCTA TACACAAAGG GCCGAGTCTC ACCAGTCACC GGTAGCACAG
CGTCTCTTCA AATTAATGGA CAGCAAGAAA ACTAACTTGT GTGCTTCAGT GGATGTGAAA
ACAACCTCTG AGTTCTTATC TTTGATTGAT AAGTTGGGTC CTTACATTTG TTTGGTTAAG
ACCCATATCG ACATTATCGA CGATTTTTCG TATGAAGGTA CCATTGTTCC TTTGTTGGAA
TTGTCCAAGA AGCACAACTT CATGATCTTT GAAGATCGTA AATTCGCAGA CATTGGAAAC
ACTGTCAAGT CTCAGTATTC AGGTGGAGTC TACAAGATTG CCCAATGGTC AGATATCACC
AATGCTCACG GTGTTACTGG TTCTGGTATT GTTCAGGGAT TAAAGGAAGC TGCAAGAGAA
ACTACCGACG AACCAAGAGG TTTATTGATG CTTGCCGAAC TATCTTCTAA GGGCTCGATT
GCTCATGGTA AGTATACTGA AGAAACTGTG GAAATCGCCA AAACTGACAA AGAGTTTGTT
ATTGGGTTCA TTGCCCAAAG AGACATGGGT GGACAAGATG AAGGTTTCGA TTGGATTGTT
ATGACTCCTG GTGTCGGTTT GGATGACAAG GGTGACAGTT TAGGTCAACA ATATAGAACA
GTAGATGAAG TTGTTTCCAC AGGAACCGAT ATTATCATTG TTGGTAGAGG CTTATTCGGC
AAGGGTAGAG ATCCTGATGT AGAGGGCCAA AGATACAGAG AAGCTGGATG GAACGCTTAC
TTGAAGAAGA CAAGCCAAGT GTAA
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| Protein sequence | MVNVQTYTQR AESHQSPVAQ RLFKLMDSKK TNLCASVDVK TTSEFLSLID KLGPYICLVK
THIDIIDDFS YEGTIVPLLE LSKKHNFMIF EDRKFADIGN TVKSQYSGGV YKIAQWSDIT
NAHGVTGSGI VQGLKEAARE TTDEPRGLLM LAELSSKGSI AHGKYTEETV EIAKTDKEFV
IGFIAQRDMG GQDEGFDWIV MTPGVGLDDK GDSLGQQYRT VDEVVSTGTD IIIVGRGLFG
KGRDPDVEGQ RYREAGWNAY LKKTSQV
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