| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50344 |
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| Symbol | RAD3 |
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| ID | 4841113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 926894 |
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| End bp | 929275 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392428 |
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| Product | DNA helicase component of transcription factor b |
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| Protein accession | XP_001386596 |
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| Protein GI | 126140148 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR00604] DNA repair helicase (rad3) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCT TTATCGATGA TCTTCCCGTG TTGTTCCCGT ATCCCCGGAT ATACCCGGAA
CAGTATGCGT ATATGTGTGA TATCAAGAAG ACTCTTGATG TAGGAGGAAA TTGTATCCTT
GAAATGCCTT CAGGAACTGG TAAGACTGTT TCGTTGTTGT CGCTAACAGT AGCCTATCAG
ATGCATTACC CGGAGCACCG TAAGATTGTA TATTGTTCGC GTACAATGTC TGAAATCGAG
AAAGCGCTAA TTGAGTTGCA CAAGTTGATG GAGTTCAGAT CGACAGAGTT GGGGTATGTA
GAAGAATTCC GTGGATTGGG ACTTACCTCC AGAAAAAACT TATGTGTCCA TCCCACAATA
TCCCAAGAAA GAAAGGGAAA TGTAGTTGAT GAAAAGTGTC GTAGAATCAC GAACGGCCAG
TTGAAAGAGA GAATCGCGAA AGGGCTTGTT ACTCCAGATC AGGAGGTTAA CCATGCTGAA
GCCAACACCC TCTGTGATAT GCACGAGAAC ATGAACGACA TGGACCAGCA CAATTTGATT
CCCGCGGGCG TATACTCATT TGACGCGTTG ATCAAGTATT GTAAGCAAGA AGGAACTTGT
CCTTACTTCA CAGTGAGAAG AATGATTCCC TTCTGTAATA TCATTATTTA CTCGTATCAC
TACTTGTTGG ATCCCAAGAT CGCAGAAAGA GTCTCTAAGG AGCTTTCTAA AGACAGTATC
ATCATCTTTG ATGAAGCGCA CAACATTGAT AACGTCTGTA TTGAGTCGTT GTCTCTAGAC
TTAACTGATG ATACCTTGAA AAGAGCCACC AGAGGAGCCA ACAAGTTGGG AGACGCTGTG
GACGAAATGA AAGCCCATGA TAGTGAAAAG CTCCAGAACG AATACGAGAA GTTGGTAGAG
GGCTTGCGGC AGGCAGAAAT TGCGAGAGAT GAAGAGCTTT TCATGAGCAA CCCAACATTG
CCGCAGGATT TGCTCGACGA AGCTATCCCC GGAAACATCC GCAAGGCTGA ACATTTCATC
TCGTTCTTGA AGCGGTTTAT AGAATATTTG AAAACGAGAA TGAAAGTGCT ACACGTTATT
AGTGAAACTC CCATTAGCTT CCTACAGCAT TTGAAAGAAT TAACGTTCAT AGATAGGAAA
CCATTGAGAT TCTGTTCTGA GCGGTTATCA CTTTTGGTGA GAACGTTGGA ATTGTCTGAA
ATTGAAGATT TCCATGCCTT GAAGGATATC GCTACATTTG CTACACTAGT TTCCACATAC
GATACTGGAT TCCAGCTTAT CTTGGAACCA TTTGAATCAG AAGGGTCTAC GGTGCCTAAT
CCAATATTGC ATTTCATCTG TTTGGATGCA TCTATTGCAA TCAAACCTGT GTTTGAGCGT
TTCTCCTCAG TGATCATCAC CTCAGGAACC ATTTCACCTT TGGACATGTA TCCAAAGATG
ATGAACTTTC AGACTGTGAT ACAGGAATCT TATACCATGA CATTGGCTAG GAGATCATTC
TTGCCCATGA TCGTCACAAA GGGCTCGGAT CAAGTGTCCA TCTCATCCAG ATTTGAAATC
CGTAACGATC CATCGGTGGT GAGAAATTAT GGGTCACTTT TGATTGAATT CTCCAAGATA
ACACCAGACG GAATGGTGGT TTTCTTCCCC TCGTATCTAT ACATGGAGTC TATCATTTCT
ATGTGGCAGA CTATGGGTGT TTTAGATGAG GTGTGGAAAT ACAAGCTTAT ACTCGTAGAA
ACTCCCGATG CCCAAGAGAC ATCGTTGGCC TTGGAAACTT ATAGAAAGGC CTGTTCTAAT
GGTAGAGGTG CCGTCTTGCT TTCTGTTGCT CGTGGGAAGG TATCTGAAGG GATCGATTTT
GATCACCATT ACGGAAGAAC TGTACTAATG ATTGGTATTC CATTCCAGTA TACAGAGTCC
AGAATCTTGA AAGCACGTTT AGAATTCATG AGAGACCACT TTCAGATCAG AGAAAACGAT
TTCTTATCTT TCGATGCCAT GAGACATGCC GCGCAATGTT TGGGAAGAGT CTTGAGAGGA
AAAGATGACT ACGGTATTAT GGTTCTTGCA GATAGAAGAT TTTCCAAGAA GAAGAACCAA
TTGCCTAAAT GGATAGCCCA AGCCTTGAAT GACTCCGATA CCAATTTGTC TACAGATATG
GCGCTTGCCA CTGCCAGGAA ATTTTTGCGG AGTCTTGCTC AGCCAGCAAA TCCTAAGGAT
CAAGAAGGTG TTTCTGTGTG GAACATCGAG CAATTGCAAC AGTTCCAGCA ACAGCAGCAG
ATGAGAATGG AGGCATTGGG AGTTGCGAAA GAAAAAGGAA ACGGCGATGC TGCCGAAGAG
GATTTCATGG ATATTGACGA TGACGACCTT GACTTGTTAT AG
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| Protein sequence | MKFFIDDLPV LFPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ
MHYPEHRKIV YCSRTMSEIE KALIELHKLM EFRSTELGYV EEFRGLGLTS RKNLCVHPTI
SQERKGNVVD EKCRRITNGQ LKERIAKGLV TPDQEVNHAE ANTLCDMHEN MNDMDQHNLI
PAGVYSFDAL IKYCKQEGTC PYFTVRRMIP FCNIIIYSYH YLLDPKIAER VSKELSKDSI
IIFDEAHNID NVCIESLSLD LTDDTLKRAT RGANKLGDAV DEMKAHDSEK LQNEYEKLVE
GLRQAEIARD EELFMSNPTL PQDLLDEAIP GNIRKAEHFI SFLKRFIEYL KTRMKVLHVI
SETPISFLQH LKELTFIDRK PLRFCSERLS LLVRTLELSE IEDFHALKDI ATFATLVSTY
DTGFQLILEP FESEGSTVPN PILHFICLDA SIAIKPVFER FSSVIITSGT ISPLDMYPKM
MNFQTVIQES YTMTLARRSF LPMIVTKGSD QVSISSRFEI RNDPSVVRNY GSLLIEFSKI
TPDGMVVFFP SYLYMESIIS MWQTMGVLDE VWKYKLILVE TPDAQETSLA LETYRKACSN
GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFM RDHFQIREND
FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSKKKNQ LPKWIAQALN DSDTNLSTDM
ALATARKFLR SLAQPANPKD QEGVSVWNIE QLQQFQQQQQ MRMEALGVAK EKGNGDAAEE
DFMDIDDDDL DLL
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