| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33739 |
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| Symbol | SAN1 |
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| ID | 4840867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 366829 |
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| End bp | 368650 |
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| Gene Length | 1822 bp |
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| Protein Length | 607 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392182 |
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| Product | mating-type transcriptional regulator (putative) |
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| Protein accession | XP_001386658 |
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| Protein GI | 150866907 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5243] HRD ubiquitin ligase complex, ER membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0111037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCA ACAACCGTGA AACCACTAGT CCAGGCGGGA ATAACCCGTC TGCTGACTCT
TCCACTAACA TGACAGATGC CGAATATATT GGCAATCTTT TGAACAACAC TAATACAAAT
GCAACTAATT CAAACTCAAC TAATTCAGGC CCGACTAATT CAAACTCAAC CAATTCAAAT
TCAACTAACA CAAGTACACA CAATACAAGC TCTTCTGGCA ATAATAGCAG TGCCACTGGC
AATGGAAATG GGAATACTTC CCCCATGAGA AGAATGCCTT CTTCAGCATC GTCCAATTCT
GGTAATACTT CATCATCTTC CAGCCGCATA TTCTCTGCAT TTAATAGAAG TCATAGAGCG
GAGTTAGGTC TTTTTGATAG ATTTAGAGAT ACGGTTTCGG GTTTGTACCG TTCCAACAGA
ACCAGCAGAG AAGGTAGTCA CCAGCCTAAC TCTGCTACAC AGACTTCTAC AGATATACCT
ACTGTTGTGC CACAGGCTGC TCAGCTTGAA ACAACTGCTA CAATCGATAC CAGCGGCCCT
ACCACTGGAC CTTCTGCTCT GACTTTCAAC AGTGAAAGTG ACTATACTCG TGCTATAGTC
ATCACCGTTA ACTATGTGTT TTCTGACGAG AACAACCCTC AGTATCCCAA CAGGGCCGGA
TCATTGATCA TGTCACTCCC CAATAATTCA TCCAATAGAG ACCCCAGAGT AATCCAGGAG
TTCATCAGAT TGGCCACACA AATGGCTTAT TCCACCATCA TTAACGGTTT ACACAAGGAG
AAAGGTGTAA CTCTTTGTAA ATTCAATTCT TTCCCGAGTG TTAAGGAAGC TGATTTGGGC
GATTCTCGAG CATGCTCTAT CTGTTTTGAC GAATTTGACA TGGTAGAAGC AGAAAAAGAA
AAATCATTGG TAGACGAAAG TGATGATGAG CTAGTTGTAG TGAAGAAGAG AAGAATAGAC
GAACTAAGAC TGGCTGCTAC GAGCGAAAGC AATAGCAGAG TACAATCCGA TGACGAATCA
GACTCGGCTA TTCCTCCCTC GAACAACATT CTTGAAAGCA CTTCCATCGA CTCCACAAAC
ACCGATCTAC CCAATACAGA CCCTGCAAGT ACATCGAATA CAAATCCAAC TAATACAAAT
ACACCCAGCA CCAATGAAGA GCTGGCAGAG CCAAAGTACT TATCTGAGTA CACTGGGGTT
TTTGATCATA GCCCAATCAG GATGACTTGT GGTCATATCT TTGGAAAGGA TTGTCTTTCG
GAATGGTTAA AAGAGCACAC TACTTGCCCA TTGTGTAGAG ATTCAGTCGC AGAACCAACG
TCAAGAACGA ATTCAAGCAA TGTGACAATC TTTAACTTAC CTACCAACTC TAGTCGTCCA
ACTACAACCG AAGCTCATGT TGACATTAAC GAGACTACGA CTCCCCAAGA AGAAACCTCA
ATTGACTCAG ATACCGTTTA TCGGGAAGCT GACAGATTCC ACTACTTTCC TTTATCAGGA
GGTTCAGCGC GTCCTTTGAG AAGAGTTCTC AGATCTGGAA GCGGTATATC TGATGCGGCA
GCAGAACAGA CAGAAAGAGA CTACTCTACC TCACACAGCC AGTTTTCTCA CATCTTGGGC
TTTCTTAGAA GACAAAGAAC AGGCAACCAT CCTGAGCCAT TGTTTCCAAC TGGAATTTCC
AGCAGAAGAA CAGCCAATGG TATTGAGACG AGACTGACTG ATGAAGATGA CGATGCTGCT
TCGGAAATTC TCGATTTCAT GAATTTGCAT GAGTTTAATC CTCCGGTCAA TTCTGATTCA
GCGAACACTA TTTCTGAAGC AG
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| Protein sequence | MNSNNRETTS PGGNNPSADS STNMTDAEYI GNLLNNTNTN ATNSNSTNSG PTNSNSTNSN
STNTSTHNTS SSGNNSSATG NGNGNTSPMR RMPSSASSNS GNTSSSSSRI FSAFNRSHRA
ELGLFDRFRD TVSGLYRSNR TSREGSHQPN SATQTSTDIP TVVPQAAQLE TTATIDTSGP
TTGPSASTFN SESDYTRAIV ITVNYVFSDE NNPQYPNRAG SLIMSLPNNS SNRDPRVIQE
FIRLATQMAY STIINGLHKE KGVTLCKFNS FPSVKEADLG DSRACSICFD EFDMVEAEKE
KSLVDESDDE LVVVKKRRID ELRSAATSES NSRVQSDDES DSAIPPSNNI LESTSIDSTN
TDLPNTDPAS TSNTNPTNTN TPSTNEESAE PKYLSEYTGV FDHSPIRMTC GHIFGKDCLS
EWLKEHTTCP LCRDSVAEPT SRTNSSNVTI FNLPTNSSRP TTTEAHVDIN ETTTPQEETS
IDSDTVYREA DRFHYFPLSG GSARPLRRVL RSGSGISDAA AEQTERDYST SHSQFSHILG
FLRRQRTGNH PEPLFPTGIS SRRTANGIET RSTDEDDDAA SEILDFMNLH EFNPPVNSDS
ANTISEA
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