| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91105 |
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| Symbol | TPI1 |
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| ID | 4840505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 1028545 |
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| End bp | 1029406 |
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| Gene Length | 862 bp |
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| Protein Length | 248 aa |
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| Translation table | 12 |
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| GC content | 48% |
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| IMG OID | 640391820 |
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| Product | Triosephosphate isomerase (TIM) (Triose-phosphate isomerase) |
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| Protein accession | XP_001386385 |
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| Protein GI | 126139725 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGGATTTAT ATCGCTATAG CTATTATCGT CGCCCTCTCC GCAATAATCT CCTTCTAATT
TTTCACAATG GCTCGTCAAT TCTTCGTTGG TGGTAACTTC AAGATGAACG GTACCAAGGA
CTCGGTCACC AAGATCATCG ACAACTTGAA CTCCGCTGAA TTGCCTACTT CCGTCGAAGT
GGTCATCGCT CCTCCTGCCC CATACTTGGC TTTGGCTGTT GCTGAAAACA AGCAGCCCAC
CATTGCTGTC TCTTCCCAGA ACGTCTTTGA CAAGGCTTCA GGTGCCTACA CCGGAGAAAT
CTCGCCAGCC CAGGTTTTGG ACTTGGGTGC CAAATGGACT TTGACCGGCC ACTCCGAAAG
AAGAACTATC ATCAAGGAGT CTGACGAATT CATCGCCGAC AAGACCAAGT TCGCCTTGGA
ATCAGGCTTG TCAGTTATCT TGTGTATCGG TGAAACCTTG GAAGAGCGTA AGGCTGGTAT
CACCTTGGAC GTTTGTGCTA GACAATTGGA CGCTGTTTCC AAGATCGTTT CCGACTGGTC
CAACATCGTC GTTGCCTACG AACCAGTGTG GGCTATCGGT ACCGGTTTGG CTGCTACTCC
TCAAGATGCC CAAGACACCC ACAAGGGTAT CAGAGACCAC TTGGTCAAGA CCATCGGTGC
CGAACAAGCA GCTGCTGTGA GAATCTTGTA CGGAGGCTCT GTTAACGGCA AGAACGCTCC
AGAGTTCAAG GACAAAGCCG ATGTCGATGG GTTCTTAGTC GGTGGTGCTT CGTTGAAGCC
AGAGTTTGTT GACATCATCA AGTCCAGATT GTAGATATAG TCTAAAAGAT ATGATTGAGA
AATATATGCT TGAACTTTGA AA
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| Protein sequence | MARQFFVGGN FKMNGTKDSV TKIIDNLNSA ELPTSVEVVI APPAPYLALA VAENKQPTIA
VSSQNVFDKA SGAYTGEISP AQVLDLGAKW TLTGHSERRT IIKESDEFIA DKTKFALESG
LSVILCIGET LEERKAGITL DVCARQLDAV SKIVSDWSNI VVAYEPVWAI GTGLAATPQD
AQDTHKGIRD HLVKTIGAEQ AAAVRILYGG SVNGKNAPEF KDKADVDGFL VGGASLKPEF
VDIIKSRL
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