| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90828 |
|---|
| Symbol | FAO1 |
|---|
| ID | 4840653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | + |
|---|
| Start bp | 370988 |
|---|
| End bp | 373299 |
|---|
| Gene Length | 2312 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640391968 |
|---|
| Product | long chain fatty acid oxidase |
|---|
| Protein accession | XP_001386087 |
|---|
| Protein GI | 126139129 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.654464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AAATGAGTTC ATTTCTGCAT AACGTATTCT GCATGGAAAT TAGTATATAT AATAGTTGAT
AATCTGAACT CACCTTTGCT ACTTAACGGA ATAATAGCTA CAACTCGTTA TATTTACTAA
TAATATGAGT TCGGTTAGTG AGAGTCATAT AGAGATTTTG GTGGCATTGG CCGATGGGAT
CATCCATGAC ACAACGGCCG ATGTCGTCAG ACCCTACTTG GACCCCGGAT TTCCAATTGA
CAGGCTTGAA GAATACTTGA AGAACTACAC CAGACCCTCA GAAACAGAAG GGTTTAAGCA
ATTCGTCACT AACGTGATCA ATTCGAATCC GACCCATTCC AGGAGAATGT TCACTGTGCT
TATGACGGTG TTAGACTCCC GGATCTTAGC ACCAACTCTC ACGGGCTCGC TTACATTGAT
CAGAGATATG ACGGTAGAAC AGCGTGAGCA GCTATTACAA TCGTGGAGAG ATTCTCCTAT
AGTGACCAAA AGACGTGCAT TCAGAATGGT GCACGCTGCA GCCGTGTCCA CATTCGCGAG
AATGGCTACA GACTTGCACT TGAAGGCTAT TGGCTATCCT GGAGTCGAGA CGAGAGAAAA
GCTATATGCT GACCAAGTGC CCGACACTTT CAAATATTCG ATGTTGAAAA AACCACAAGT
TGACGGCTAC GAGTTGCACA TTCCTGACGT CGATGTGTTA ATCATTGGGT CTGGTTCTGG
TGCCGGTGTC GTTGCTCATA CTATAGCTGA AGCAGGATAT AAGGCTTTGG TTCTCGAGAA
AGGAAAGTAC TTTTCGAGCG AAGAATTCAC CTTCAATGAC TTGACTGGAT ACCAGAACTT
GTATGAACAA CAAGGTGCCT TAGTCTCTTC CAACCAACAG TTGTTCGTAT TGGCTGGGTC
TACATTTGGT GGAGGTTCTG CCATCAACTG GTCTGCTTGT TTGAAGACTC CATTCAAGGT
CAGAAAAGAA TGGTACGACG ACTTTGGTCT TGAATGGGCT GCCAGCGAGT CATTTGACAA
GTGCACTGAC TATGTATGGA CTCAGATGGG TGCGAACAAG AACAACATCA ATCATTCTTT
AGCCAATAAA GTTATTTTAG AAGGTGGTGC CAAGTTGGGC TACAAGGTCA AGGAAGTGGA
ACAGAACAAT GGAGCCCACG CTGATCACAG CTGTGGTTTT TGTCACCTCG GTTGTAAATA
CGGAATCAAA CAGAGTTCCC CAGCTTGCTG GTTCAGAGAA CCAGCAGACA AGGGCTCATT
GTTTATGGAC CAAGTTAAAG TGATCAAGGT TCTCCACAAT CGTGGAGTAG CCATCGGAGT
CTTGTGTGAA GATATCCTCA CTGGAAAGCA GTTCAAAATT ACAGGTCCTA AGAAGTACGT
AGTGAGTGGT GGTTCATTGT GTACGCCAGT TGTTTTACAG AACTCCGGTT TCAGAAACAA
GCATATAGGT GCCAACTTGA AGTTGCACCC TATCTCGATT GTTTTCGGAA ACTTTGGCAG
AGAAGCCAGA GCTGATCCTC ATGAACATCC TATATTGACT TCTGTGTGCA CTGAGGTGGA
CGATTTGGAT GGAAAGGCTC ACGGTGCTAA GATCGAAACC GTTTTGAATG CTCCATTCTT
GGAGTCGGTA TTCCTTCCAT GGCAGAACAG TGACAAGCTC AGAGAAGACT TGTTGAAGTA
CCAGAATCTT GCAACCATGT TGCTAATCAC AAGAGACAAA TCCAGCGGAT ATGTGAGGGC
AGATTCCAAC GCTCCTAATT CGTTGATTGT TGACTACACA GTTAACCAAT ACGACCGTAA
TGCTTTGCTC CAGGCTTTTG TCACCACTGC AGACATGCTC TATATCCAAG GTGCAAAAGA
GATTTTTGGT TCCCAAGCAT GGCTTCCTGT GTTCAAGTCA GAAAAACCCA AACACGAAAG
AGCCATCACC GACCAAGACT TTGTGGATTG GAGAAATGCC GTGTTGAAGA TAGGCTTAGA
TTCATACGGA AACGTGTATG GTTCTGCTCA TCAGATGAGT TCCTGCCGTA TGTCTGGAAA
GGGCCCTAGA TACGGGGCTT GTGACGAGAA CGGCCATTTG TTTGAATGTA AAAATGTCTA
CGTTGCAGAT GCCAGCGCTA TGCCTACCGC CAGTGGTGCC AATCCTATGA TCACAACCAT
GGCTATAGCA AGACATGTAG CTCTTGGACT TGTCAAGGAC TTGCAACCAG CAGCAAAGCT
TTGATTTATT TATGTAATGA TTGAATACTA TTGTACACTT GCAATTAGAT ACACTGTGTA
CTACTGTATA TGATATTAAA GATTTTGTAA TT
|
|---|
| Protein sequence | MSSVSESHIE ILVALADGII HDTTADVVRP YLDPGFPIDR LEEYLKNYTR PSETEGFKQF
VTNVINSNPT HSRRMFTVLM TVLDSRILAP TLTGSLTLIR DMTVEQREQL LQSWRDSPIV
TKRRAFRMVH AAAVSTFARM ATDLHLKAIG YPGVETREKL YADQVPDTFK YSMLKKPQVD
GYELHIPDVD VLIIGSGSGA GVVAHTIAEA GYKALVLEKG KYFSSEEFTF NDLTGYQNLY
EQQGALVSSN QQLFVLAGST FGGGSAINWS ACLKTPFKVR KEWYDDFGLE WAASESFDKC
TDYVWTQMGA NKNNINHSLA NKVILEGGAK LGYKVKEVEQ NNGAHADHSC GFCHLGCKYG
IKQSSPACWF REPADKGSLF MDQVKVIKVL HNRGVAIGVL CEDILTGKQF KITGPKKYVV
SGGSLCTPVV LQNSGFRNKH IGANLKLHPI SIVFGNFGRE ARADPHEHPI LTSVCTEVDD
LDGKAHGAKI ETVLNAPFLE SVFLPWQNSD KLREDLLKYQ NLATMLLITR DKSSGYVRAD
SNAPNSLIVD YTVNQYDRNA LLQAFVTTAD MLYIQGAKEI FGSQAWLPVF KSEKPKHERA
ITDQDFVDWR NAVLKIGLDS YGNVYGSAHQ MSSCRMSGKG PRYGACDENG HLFECKNVYV
ADASAMPTAS GANPMITTMA IARHVALGLV KDLQPAAKL
|
|---|
| |