Gene PICST_85057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85057 
Symbol 
ID4840561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp1030004 
End bp1030914 
Gene Length911 bp 
Protein Length276 aa 
Translation table12 
GC content42% 
IMG OID640391876 
Productpredicted protein 
Protein accessionXP_001386386 
Protein GI150866707 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTATGTTCT ATACTTCACC ATATTCAAGA GCCAGACAGA CATGTAACAA CATCATTGAG 
GGAATCAAAG ATCTTCCAGG GGTAGATTAT ACCATTCGTG AAGAAACACG GATGCGTGAA
CAGGATTTTG GAAACTTCCA AGCCACTCCA GAGGAGATGG AGCGCATCTG GGAAGAAAGA
GCTCATTATG GCCATTTCTT TTATAGAATC CCACACGGGG AGTCTGCTGC TGACGTGTAT
GACAGAATTG CCAGTTTCAA TGAATCACTA TTCAGACAAT TTCAGCAGGA CGATTTCCCT
AACATTTTGG TGTTGGTGAC GCATGGAATC TGGGCAAGAG TGTTTTTGAT GAAATGGTTC
AGATGGAGCT ACGAAGAGTT TGAGCTGTTG AAAAACATTC CTCATTGCCA TTATTTGATT
ATGAAAAGAC ATGATGGAGG CAAGTTCTTC CTCAAGACAC GTTTGCTCAC GTGGGATGAT
GTGGACGAGG ATGACATTGA TGCCCAGGTC GTCAAGGAGG TTGGAGACGA GGTCTGTTTC
AACTCTCAAA ATAAACTTAC CAATCCCGAA GATCTTGATA TCAGCGGGAT TATCGAGGCT
CAGAAAATCG CCATTAGACA GTTGCGGGAG AAAAACAAAA AGATTAAGGA AGCCTACGAC
AAGATACACA GCAACGGCAA TGGCTACACC GATTACCGTG AGAAGATGGT TTCTCGGTTC
AAGTTGGATA ACCAGAGTGT GGTAAATAGT GTTGAGAATC TTAGCGGACA ATTATCTCCA
ACGAGAAACT TTTCGCCTAG TATATCTGGG ACATTGTCGC CTCCATCTCG TTGAGCATGG
TTGTCTATTT ATTTCGTATT TGCATTGGTT CATATATTCA CTTCATTCAG GAGACGTTTA
ATACATTGAA T
 
Protein sequence
MFYTSPYSRA RQTCNNIIEG IKDLPGVDYT IREETRMREQ DFGNFQATPE EMERIWEERA 
HYGHFFYRIP HGESAADVYD RIASFNESLF RQFQQDDFPN ILVLVTHGIW ARVFLMKWFR
WSYEEFESLK NIPHCHYLIM KRHDGGKFFL KTRLLTWDDV DEDDIDAQVV KEVGDEVCFN
SQNKLTNPED LDISGIIEAQ KIAIRQLREK NKKIKEAYDK IHSNGNGYTD YREKMVSRFK
LDNQSVVNSV ENLSGQLSPT RNFSPSISGT LSPPSR