| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68406 |
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| Symbol | |
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| ID | 4840512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 1078049 |
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| End bp | 1081148 |
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| Gene Length | 3100 bp |
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| Protein Length | 999 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391827 |
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| Product | predicted protein |
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| Protein accession | XP_001386399 |
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| Protein GI | 150866717 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.094593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAAGAACCAA TCTTCTTCTC TATATCAGCA ACGATGTCCA GTACTCGTCC CGATCTCAGA
TTCACCGATA CGGTAGACGA ACGGCTGTTC TACCGTAAAT ATGCTGGCCT TTCTACCAAA
GATGCCTCTA CTATCAGATT CATTGACCAC AACAACAAGG ACTATTTCAC TGCCCTCGAC
GAAGACGCTG ATCTTGTAGC AGAGAACATT TACAAAACAC AATCTGTACT CAAATATAAC
AACAGCAACA AAAACAGATA CGTCACAATC CTGCCTCAGG TATTCTTGAA CAATGTGTTG
AAGTTCTGTA TCATCGACAG ACATATGAAG GTGGAGATAT ATCACAACAA AACGTTCCAA
TTGCTCAGCA CAGCAACGCC GGGTAACTTG GAAGCTCTTG CCAACGAGTA TGGTGTCAAT
TTGGAAGGCA TGTTTCAGGA CTGTTCGACT CCCATGGTGG CTAGTATTAA GTTTCAACAA
ACAGGAAGCG CTAGAAAAGT TGGGGTTTGC GTCATAGACA CACTGAACTC GACTATTCAA
GTATCTGAAT TCGAAGACAA CGACCTCTTC TCTAACCTTG AAAGTTTATT GTTACAATTG
GGTGTAAAAG AAGTCGTGTT GCCTTCGAAC TACAGTGCCA AAGATGAGAA TACCGAATCA
ATAAAGCTCT TTCAAGTCTT GGATAAAATC GGTTACCTTG TCGTCAGCTC CGTTAAATCG
TCATTCTTTA CAACTAAAGA TATTGAGCAG GATTTGCGCA AGTTGGTGCT GTCTGAAAAC
CAAAAAGATG ATGATGATGT CAACGTCGAT TTGTTGTTGG CTTCCAAAGG AATCAATACG
GCCGACTTCG CCCACTCGCT TGCTTGTTGC AACGCATTAA TTGCATACCT CCAGTTGTTG
CTGGACGATG TACAGAATTC TTTCACTATA GAGCAGTACA ATTTGAGTTC ATACATGAAA
TTGGACTCTT CTACAATGAA GGCTTTGAAT ATTTTCCCAT CTTCGAATTC TGGAGTTTCC
AATGCTCTTG TTAAATCTTC CAATATCAGC TCGATCTTTG AGTTATTGAA CAAGTGTAGA
ACTGCGGCAG GTTCTAGATT ACTTTCTCAA TGGTTGAAAC AGCCCCTCAC TAGCTTGTCC
ATGATCGAGG AAAGGCTAGA TTTGGTGAAC TATCTCGTGG ACGGTACCAA CTTCAGAGTA
TATGCCAACC AAGAGTTCTT ATCGCAGGTA CCTGATATAA GAAGACTTTT GAAAAAGATT
AGCAATGGTT TGTCAAAGTC TACTGGCAAC GAAAATAAGA AGTTAGAGGA TATTGTCGTA
TTGTATCAGT TAGTATTGGC TTTGCCTGCA TTCATTGACA TGAGTAAAAT GGTGATTGCT
GATATCGAGG AAAAGGATTC ATTGCCGGTA GCAAATTTGA TAAAGAAGCA TTGGCTCGAG
CCAGTCGAGA AGAGTCTTGA ATCCTTATCA AAATTCCAAG AGATGATCGA GACAACCATT
GACTTATCGC CATTAGAATC AAGTTCTGCT TATGACCAAT TGCATTCTGA TTTCAATGTG
AGACCAGAAT TTGACGAGTC CCTTATTGAA ATTAATGATA AATTACAAGC CAGTCTTGCT
GAAATAAAAC AATTACATAT TGAAGTTGCT GACGACTTGA ATATGGAATT GGACAAGAAA
TTGAAGTTAG AGAAACATAT ACAACACGGT TGGTGTTTTA GAGTTACCAG AAATGATTCT
ACCGTCTTGA GAAATACCGG TAACAAATAT TCTCAGCTCC AGACTGTTAA GGCTGGTGTC
TTCTTTACCA CCAAGAGATT AACTTTGCTA TCCCAGGAAT ATGCAGAGGC TCTTCAAGAA
TACAATACCA AACAGCGCGA GTTAATTAAG GAGATATTGT CCATTTCTTT GTCATATCAA
TCGGTTTTTA TGAACTTGTC ATTGACGCTT GCACATTTGG ATGTATTAGT CAGCTTTGCT
AATGTGGCAA TAGTGGCACC AACCGTATTT GCAAGACCGA AGTTGCATCC ATTGAGCAAT
GATATTGATT CGGACCAATT CAAGAATAGA AAAATCAAGC TAAGAGAAGC CAGACATCCT
GTATTGGAAG TACAAGATGA CATTAATTTC ATTGCCAATG ATGTCTTTTT ATCAAACGAT
GCATGTGACA AAGGGAAGCC TTTTGTTATC ATAACTGGTC CAAATATGGG TGGTAAGTCA
ACATACATAA GACAGATTGG TGTTATTGCC TTGATGGCGC AAATTGGATC ATTCATCCCT
GCTAATGAAG ACGATTTTCC AGAATTGCCC ATCTTTGATG CTATCTTATC AAGAGTGGGA
GCTGGAGACT CCCAGCTTAA GGGTTTATCT ACTTTCATGA TCGAGATGTT GGAGACTTCG
TCCATTTTGG CCACAGCAAC ACAAAACTCG TTGATTATCA TCGATGAGTT GGGAAGAGGT
ACTTCTACTT ACGATGGTTT TGGATTAGCT TGGTCAATTC TGGAACACCT CATTAAAGAA
AAAAGCTGTT TCACGTTATT TGCAACCCAT TTTCACGAAT TGACTCAATT ATCATCCAAA
TATGAGGACA AAGTTGACAA CTTACATGTT GTTGCCCATG TAGAAAACAA AGATGAAAAT
GACGATGACA TCACTTTGAT GTACCGTGTT GAACCAGGAG TATCCGACAA ATCGTTTGGT
ATTCATGTTG CTGAATTGGT TAAGTTTCCA TCGAAGATTA TCAACATGGC GAAGAGAAAA
GCTTCAGAGT TGCAAGATAT GAATGTTACA GAGGAAGACA AGTTTATCCA GAACAAAAAA
ACGAAGTGTT CTGCCGAAGA GATTGACCGT GGAGTTGACA CCTTGAAGAC GATCTTGAAG
AAGTGGAAAG ATGAATGCTA TGATCCTGAG ACATCCAAGA GTCGCTTTGA AAGTGGCGAG
GCAGTCAACA AGCTCAAGCA ATTGGTCGAA GGTGAGTTTT CAGGGGTGGT TGCGAACGAT
AAGTTCATAA ATGAAGTTCT TACGGCATTG TGAAGTGGTA TTGTGATATC TAGTGTAGAA
ATTGAACTAT TATTATCATA TAAATAAACG AATGAAATGT
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| Protein sequence | MSSTRPDLRF TDTVDERSFY RKYAGLSTKD ASTIRFIDHN NKDYFTALDE DADLVAENIY
KTQSVLKYNN SNKNRYVTIS PQVFLNNVLK FCIIDRHMKV EIYHNKTFQL LSTATPGNLE
ALANEYGVNL EGMFQDCSTP MVASIKFQQT GSARKVGVCV IDTSNSTIQV SEFEDNDLFS
NLESLLLQLG VKEVVLPSNY SAKDENTESI KLFQVLDKIG YLVVSSVKSS FFTTKDIEQD
LRKLVSSENQ KDDDDVNVDL LLASKGINTA DFAHSLACCN ALIAYLQLLS DDVQNSFTIE
QYNLSSYMKL DSSTMKALNI FPSSNSGVSN ALVKSSNISS IFELLNKCRT AAGSRLLSQW
LKQPLTSLSM IEERLDLVNY LVDGTNFRVY ANQEFLSQVP DIRRLLKKIS NGLSKSTGNE
NKKLEDIVVL YQLVLALPAF IDMSKMVIAD IEEKDSLPVA NLIKKHWLEP VEKSLESLSK
FQEMIETTID LSPLESSSAY DQLHSDFNVR PEFDESLIEI NDKLQASLAE IKQLHIEVAD
DLNMELDKKL KLEKHIQHGW CFRVTRNDST VLRNTGNKYS QLQTVKAGVF FTTKRLTLLS
QEYAEALQEY NTKQRELIKE ILSISLSYQS VFMNLSLTLA HLDVLVSFAN VAIVAPTVFA
RPKLHPLSND IDSDQFKNRK IKLREARHPV LEVQDDINFI ANDVFLSNDA CDKGKPFVII
TGPNMGGKST YIRQIGVIAL MAQIGSFIPA NEDDFPELPI FDAILSRVGA GDSQLKGLST
FMIEMLETSS ILATATQNSL IIIDELGRGT STYDGFGLAW SISEHLIKEK SCFTLFATHF
HELTQLSSKY EDKVDNLHVV AHVENKDEND DDITLMYRVE PGVSDKSFGI HVAELVKFPS
KIINMAKRKA SELQDMNVTE EDKFIQNKKT KCSAEEIDRG VDTLKTILKK WKDECYDPET
SKSRFESGEA VNKLKQLVEG EFSGVVANDK FINEVLTAL
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