Gene PICST_63463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63463 
Symbol 
ID4840641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp312828 
End bp313652 
Gene Length825 bp 
Protein Length274 aa 
Translation table12 
GC content42% 
IMG OID640391956 
Productpredicted protein 
Protein accessionXP_001386075 
Protein GI150866459 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0831257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGTG AAGACATCTT GTATGAAGTA AGAGGTAAGG TTACCATCAT TACTTTCAAC 
ATTCCACAAA AGTTGAATGC CCTTAATGGA GAACAATACT TATTGTTGGC CAAGTTGGTT
GAAAGAGCAG ACAAGGAAGA AGACACTATT TTGACCTTGA TTCAGTCCAG TGGACGTTTC
TTCTCGGCTG GCGCAAACTT CGCCGATAAA AGTCTTGCTA ATACCGATGC AGCAGACTTA
TTTTCTCACG AGTACTGGTT GAACAGATTC GTCGCCAGAA ACACCTACCT TACTGAATTG
TTCCATAACC ACCGCAAGAT ATTGGCTGCT GCTGTTAACG GCCCTGTCAT TGGTTTATCT
GCTTCCCTCT TGGCATTGTG TGACTTGATC TATGTCAAGG AAGAAAAAGA CTTCTACATT
TTGACTCCAT TTGCAAACTT GGGATTGGTC GCAGAAGGTG CTGCCTCTGC AACCCTCTTC
TTGAGATTGG GCTGGTCGAA GGCTTCTGAG GCATTGTTGT TAGCTAAGCC AATCAGTGGT
AAGGATTTGA ATAACTTGGG TTTTATCAAC AAGACTTACG ATGGACAGTT CAAGACCACT
GAAGAATTCA ACCAAGCGGT CCATGATGAA TTGGTTAATG CCTTTGAAAA CTTGCACTTT
GACTCTATTA TTCAAAACAA ACAACTCTTG AAGCTGAACA GAGATCAATT GATAACTAGC
GCCAACTCCA AGGAAGTTAT CAGGGGGTTT AACAAGTGGA TCGAAGGTGT TCCTCAAGGT
AGATTTGTAC AGTTGGCGCA AAAGGACATC AAGCACAAGT TCTAA
 
Protein sequence
MEGEDILYEV RGKVTIITFN IPQKLNALNG EQYLLLAKLV ERADKEEDTI LTLIQSSGRF 
FSAGANFADK SLANTDAADL FSHEYWLNRF VARNTYLTEL FHNHRKILAA AVNGPVIGLS
ASLLALCDLI YVKEEKDFYI LTPFANLGLV AEGAASATLF LRLGWSKASE ALLLAKPISG
KDLNNLGFIN KTYDGQFKTT EEFNQAVHDE LVNAFENLHF DSIIQNKQLL KSNRDQLITS
ANSKEVIRGF NKWIEGVPQG RFVQLAQKDI KHKF