Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_63463 |
Symbol | |
ID | 4840641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 312828 |
End bp | 313652 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391956 |
Product | predicted protein |
Protein accession | XP_001386075 |
Protein GI | 150866459 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0831257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGGTG AAGACATCTT GTATGAAGTA AGAGGTAAGG TTACCATCAT TACTTTCAAC ATTCCACAAA AGTTGAATGC CCTTAATGGA GAACAATACT TATTGTTGGC CAAGTTGGTT GAAAGAGCAG ACAAGGAAGA AGACACTATT TTGACCTTGA TTCAGTCCAG TGGACGTTTC TTCTCGGCTG GCGCAAACTT CGCCGATAAA AGTCTTGCTA ATACCGATGC AGCAGACTTA TTTTCTCACG AGTACTGGTT GAACAGATTC GTCGCCAGAA ACACCTACCT TACTGAATTG TTCCATAACC ACCGCAAGAT ATTGGCTGCT GCTGTTAACG GCCCTGTCAT TGGTTTATCT GCTTCCCTCT TGGCATTGTG TGACTTGATC TATGTCAAGG AAGAAAAAGA CTTCTACATT TTGACTCCAT TTGCAAACTT GGGATTGGTC GCAGAAGGTG CTGCCTCTGC AACCCTCTTC TTGAGATTGG GCTGGTCGAA GGCTTCTGAG GCATTGTTGT TAGCTAAGCC AATCAGTGGT AAGGATTTGA ATAACTTGGG TTTTATCAAC AAGACTTACG ATGGACAGTT CAAGACCACT GAAGAATTCA ACCAAGCGGT CCATGATGAA TTGGTTAATG CCTTTGAAAA CTTGCACTTT GACTCTATTA TTCAAAACAA ACAACTCTTG AAGCTGAACA GAGATCAATT GATAACTAGC GCCAACTCCA AGGAAGTTAT CAGGGGGTTT AACAAGTGGA TCGAAGGTGT TCCTCAAGGT AGATTTGTAC AGTTGGCGCA AAAGGACATC AAGCACAAGT TCTAA
|
Protein sequence | MEGEDILYEV RGKVTIITFN IPQKLNALNG EQYLLLAKLV ERADKEEDTI LTLIQSSGRF FSAGANFADK SLANTDAADL FSHEYWLNRF VARNTYLTEL FHNHRKILAA AVNGPVIGLS ASLLALCDLI YVKEEKDFYI LTPFANLGLV AEGAASATLF LRLGWSKASE ALLLAKPISG KDLNNLGFIN KTYDGQFKTT EEFNQAVHDE LVNAFENLHF DSIIQNKQLL KSNRDQLITS ANSKEVIRGF NKWIEGVPQG RFVQLAQKDI KHKF
|
| |