Gene PICST_37090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37090 
Symbol 
ID4840566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp1051062 
End bp1051733 
Gene Length672 bp 
Protein Length223 aa 
Translation table12 
GC content37% 
IMG OID640391881 
Productpredicted protein 
Protein accessionXP_001386391 
Protein GI150866710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTA AACAATCTGC ACTTATAGAA CGATTCCAGG ATTCCAAATT GAACCAGATC 
CGAGGAAATA ATGATGATAA TGATGATGAT GTGCATTCAG AAAGTGAAGA CGACTTGCTT
GCGACGTTAG ACGACGATGA TGATGATGTC ATGGCCAAAT ACAGAGAGTC AAGAATCCAA
CAGCTTTCGA AAGAATTCTC CAAAATTAAC GATACTGTCA AATCTACAAA CGAATCTGAA
TTGGGAAATG TCATTTTGAT GGAATCTGAA AAGCAAGTAA TGGACTATGT CACCAGTAAC
GAAATAGTAC TTGTTCACTT CTTCCAACCT AACTTTGCTA AGTGTAAACT CATGAATAGC
CAATTAGATC AATTAGCTGA GAAGCATTTG GAGCTTAATG TTGTCAAAAT CAAGGCTGAA
AACGCTCCCT TTTTGGTAGT AAAACTTGAG ATTAGAGTAC TTCCTGTTGT TGTTATATAT
AGAGACGCTA AGGTGATTCT GAGAATTGTA GGGTTTGCAG ATCTTGGAAG CAATCCTGAT
TCGTTCACTT ACGAACAGTT AGAAAACTAC ATGGCTTGGA AGAATGTGAT TTCGAGAAAG
ACCATTAGCT ACAAGCATAT CCGCAGTAAT AAAAAGGAAG AAAGTGATGA TGATTTTGAT
TATTTCGAAT GA
 
Protein sequence
MDSKQSALIE RFQDSKLNQI RGNNDDNDDD VHSESEDDLL ATLDDDDDDV MAKYRESRIQ 
QLSKEFSKIN DTVKSTNESE LGNVILMESE KQVMDYVTSN EIVLVHFFQP NFAKCKLMNS
QLDQLAEKHL ELNVVKIKAE NAPFLVVKLE IRVLPVVVIY RDAKVISRIV GFADLGSNPD
SFTYEQLENY MAWKNVISRK TISYKHIRSN KKEESDDDFD YFE