Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_37090 |
Symbol | |
ID | 4840566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 1051062 |
End bp | 1051733 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640391881 |
Product | predicted protein |
Protein accession | XP_001386391 |
Protein GI | 150866710 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCTA AACAATCTGC ACTTATAGAA CGATTCCAGG ATTCCAAATT GAACCAGATC CGAGGAAATA ATGATGATAA TGATGATGAT GTGCATTCAG AAAGTGAAGA CGACTTGCTT GCGACGTTAG ACGACGATGA TGATGATGTC ATGGCCAAAT ACAGAGAGTC AAGAATCCAA CAGCTTTCGA AAGAATTCTC CAAAATTAAC GATACTGTCA AATCTACAAA CGAATCTGAA TTGGGAAATG TCATTTTGAT GGAATCTGAA AAGCAAGTAA TGGACTATGT CACCAGTAAC GAAATAGTAC TTGTTCACTT CTTCCAACCT AACTTTGCTA AGTGTAAACT CATGAATAGC CAATTAGATC AATTAGCTGA GAAGCATTTG GAGCTTAATG TTGTCAAAAT CAAGGCTGAA AACGCTCCCT TTTTGGTAGT AAAACTTGAG ATTAGAGTAC TTCCTGTTGT TGTTATATAT AGAGACGCTA AGGTGATTCT GAGAATTGTA GGGTTTGCAG ATCTTGGAAG CAATCCTGAT TCGTTCACTT ACGAACAGTT AGAAAACTAC ATGGCTTGGA AGAATGTGAT TTCGAGAAAG ACCATTAGCT ACAAGCATAT CCGCAGTAAT AAAAAGGAAG AAAGTGATGA TGATTTTGAT TATTTCGAAT GA
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Protein sequence | MDSKQSALIE RFQDSKLNQI RGNNDDNDDD VHSESEDDLL ATLDDDDDDV MAKYRESRIQ QLSKEFSKIN DTVKSTNESE LGNVILMESE KQVMDYVTSN EIVLVHFFQP NFAKCKLMNS QLDQLAEKHL ELNVVKIKAE NAPFLVVKLE IRVLPVVVIY RDAKVISRIV GFADLGSNPD SFTYEQLENY MAWKNVISRK TISYKHIRSN KKEESDDDFD YFE
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