Gene PICST_37002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37002 
Symbol 
ID4840614 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp686711 
End bp688411 
Gene Length1701 bp 
Protein Length467 aa 
Translation table12 
GC content46% 
IMG OID640391929 
Productpredicted protein 
Protein accessionXP_001386324 
Protein GI150866657 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG5024] Cyclin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC ACAAGTCCAA GAACTACGGG CCCCCTTCCT ATGTCAAACC AAAGCCCTAC 
TCCATCATGC TTGAGCTCTT GGAGTCGCAG GCTAACAAAA AGTTGACTCT GGAATACACC
CAGGACATAG TCAAGACATT GTCCCACTTG GAGGCCCTCT CGTCTGTGAA TCCGTCCATG
ATCGATCTCC AGCCTGAAAT CCAGTGGTTC ATGAGACCCT TTCTCTTGGA TTTCCTCATT
GAGTTGCACT CGTCATTCAA GCTCCAGCCA CAGACGTTGT TTCTCTGTCT TAACATCATC
GACAGGTACT GTGCCAAACG TATCGTGTTC AAACGTCATT ACCAGTTGGT AGGCTGTACT
GCTCTTTGGA TTGCTGGCAA ATATGAAGAC AAGAAACTGC GGGTGCCCAC TTTGAAGGAA
CTCACCATCA TGTGTAGAAA CGCATACGAC GAAGAGATGT TTATCCAAAT GGAAATGCAC
ATTCTCTCCA CATTAGAATG GTCATTCTCT CATCCCACAT TGGAAGACTG CTTGCAATTA
GCTATCACGC ACAGCAAGAT CTCAACCCAT GCCACGCCAT GTAAATACAA TAAGTTGCAA
TCTTCGTCTT CTTCCAACTC TGCTAACACA ACTACCTCGG CCGTAACTGC TGTGGCTAGA
TTCTTCTGTG AGTTGTCTCT CTACGATAAG TACTTCTTGT CTGTGCCCAC GTCCTTGGTG
TCAATCACAG CCAACTTGTT GGCCTGCTCG ATGCTTCAGA TACCCAATGC ATCCGACTCC
TTGAAGGAGT TAATGAGAAA GGTGTTGGCC AAGAGAGTAA GGCAGTCCCG CTCTCGTAAA
AATCAGTCTA TGTATTCTAA CAATAACGAA AGCTATTATA GCCACATCGT CAATGCCGCT
AACATGAGAC ACACCAGTCT TGAAGACATC GATCCAGATT ACATTCACTG TGACGACGAA
TCGGACTATG ACGACTCTAC TACTGAGGAC GAGTTTGACG AAGAATCCAA TCAACATGAG
ATTGAGAACA GACAGCCAGA AGTACATGGT GCTTTCTTGA GTGGATTGGA CGATAATGCC
ATCGCTGTCA TCAAACGCAC AGCTCTCATG TTCATTATTC AGTTAAGCAA AGTCACAGAA
GTGTTGTCGA AAAAATATGA GAATCTCGGT GTCATACAAG TTATCAACAA CTTCCACTCG
AGATTCACCT TCATCATTCA GAGCATCTAC GAGAACCAGG AAACCATCAT CAGCCAGGAG
CCCATTGATG CTAAGTTGGA ACTGTTGGCC GAGGTTTTGT TGCAGTTTCC CAAAATGGAA
GACGATCTTG AAGATCTCAA GCCTCCTCAA TCGCCTCATA TCTTCAACAA TCCTGTGGCT
CTTAGTCTCA ACTATAACGA CTCTCACACT CAAGCTCCTG TGACTCCACC TTCTGCAAGC
TCTCAGTACT CTGTTTTCTC CAACAGGAGA CATAACAGCA GCTCCACCTG TGTAACACCT
ATCCATGCTA GCATTTCGTC GCAATCCACA TACAACTCTG GATCGTCGAG TATTCTCAGA
AATAGCAAAT CGAGAATTAG TAAGAATAAG TCTGCTATCG GTTCTGTTCC CAGCGCCAAT
AATAGCAAAA CCGAGTTTTC TCCCTTGACA GCCACAGCGT CGAGAGAAAA CAACTGGTCG
TCGCCTATCA TGCACGTCTA A
 
Protein sequence
MSNHKSKNYG PPSYVKPKPY SIMLELLESQ ANKKLTSEYT QDIVKTLSHL EALSSVNPSM 
IDLQPEIQWF MRPFLLDFLI ELHSSFKLQP QTLFLCLNII DRYCAKRIVF KRHYQLVGCT
ALWIAGKYED KKSRVPTLKE LTIMCRNAYD EEMFIQMEMH ILSTLEWSFS HPTLEDCLQL
AITHSKISTH ATPCKYNKLQ SSSSSNSANT TTSAVTAVAR FFCELSLYDK YFLSVPTSLV
SITANLLACS MLQIPNASDS LKELMRKVLA KRDEFDEESN QHEIENRQPE VHGAFLSGLD
DNAIAVIKRT ALMFIIQLSK VTEVLSKKYE NLGVIQVINN FHSRFTFIIQ SIYENQETII
SQEPIDAKLE SLAEVLLQFP KMEDDLEDLK PPQSPHIFNN PVALTPVTPP SASSQYSVFS
NRRHNSSSTC VTPIHASISA NNSKTEFSPL TATASRENNW SSPIMHV