Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_37002 |
Symbol | |
ID | 4840614 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 686711 |
End bp | 688411 |
Gene Length | 1701 bp |
Protein Length | 467 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640391929 |
Product | predicted protein |
Protein accession | XP_001386324 |
Protein GI | 150866657 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG5024] Cyclin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0120231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACC ACAAGTCCAA GAACTACGGG CCCCCTTCCT ATGTCAAACC AAAGCCCTAC TCCATCATGC TTGAGCTCTT GGAGTCGCAG GCTAACAAAA AGTTGACTCT GGAATACACC CAGGACATAG TCAAGACATT GTCCCACTTG GAGGCCCTCT CGTCTGTGAA TCCGTCCATG ATCGATCTCC AGCCTGAAAT CCAGTGGTTC ATGAGACCCT TTCTCTTGGA TTTCCTCATT GAGTTGCACT CGTCATTCAA GCTCCAGCCA CAGACGTTGT TTCTCTGTCT TAACATCATC GACAGGTACT GTGCCAAACG TATCGTGTTC AAACGTCATT ACCAGTTGGT AGGCTGTACT GCTCTTTGGA TTGCTGGCAA ATATGAAGAC AAGAAACTGC GGGTGCCCAC TTTGAAGGAA CTCACCATCA TGTGTAGAAA CGCATACGAC GAAGAGATGT TTATCCAAAT GGAAATGCAC ATTCTCTCCA CATTAGAATG GTCATTCTCT CATCCCACAT TGGAAGACTG CTTGCAATTA GCTATCACGC ACAGCAAGAT CTCAACCCAT GCCACGCCAT GTAAATACAA TAAGTTGCAA TCTTCGTCTT CTTCCAACTC TGCTAACACA ACTACCTCGG CCGTAACTGC TGTGGCTAGA TTCTTCTGTG AGTTGTCTCT CTACGATAAG TACTTCTTGT CTGTGCCCAC GTCCTTGGTG TCAATCACAG CCAACTTGTT GGCCTGCTCG ATGCTTCAGA TACCCAATGC ATCCGACTCC TTGAAGGAGT TAATGAGAAA GGTGTTGGCC AAGAGAGTAA GGCAGTCCCG CTCTCGTAAA AATCAGTCTA TGTATTCTAA CAATAACGAA AGCTATTATA GCCACATCGT CAATGCCGCT AACATGAGAC ACACCAGTCT TGAAGACATC GATCCAGATT ACATTCACTG TGACGACGAA TCGGACTATG ACGACTCTAC TACTGAGGAC GAGTTTGACG AAGAATCCAA TCAACATGAG ATTGAGAACA GACAGCCAGA AGTACATGGT GCTTTCTTGA GTGGATTGGA CGATAATGCC ATCGCTGTCA TCAAACGCAC AGCTCTCATG TTCATTATTC AGTTAAGCAA AGTCACAGAA GTGTTGTCGA AAAAATATGA GAATCTCGGT GTCATACAAG TTATCAACAA CTTCCACTCG AGATTCACCT TCATCATTCA GAGCATCTAC GAGAACCAGG AAACCATCAT CAGCCAGGAG CCCATTGATG CTAAGTTGGA ACTGTTGGCC GAGGTTTTGT TGCAGTTTCC CAAAATGGAA GACGATCTTG AAGATCTCAA GCCTCCTCAA TCGCCTCATA TCTTCAACAA TCCTGTGGCT CTTAGTCTCA ACTATAACGA CTCTCACACT CAAGCTCCTG TGACTCCACC TTCTGCAAGC TCTCAGTACT CTGTTTTCTC CAACAGGAGA CATAACAGCA GCTCCACCTG TGTAACACCT ATCCATGCTA GCATTTCGTC GCAATCCACA TACAACTCTG GATCGTCGAG TATTCTCAGA AATAGCAAAT CGAGAATTAG TAAGAATAAG TCTGCTATCG GTTCTGTTCC CAGCGCCAAT AATAGCAAAA CCGAGTTTTC TCCCTTGACA GCCACAGCGT CGAGAGAAAA CAACTGGTCG TCGCCTATCA TGCACGTCTA A
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Protein sequence | MSNHKSKNYG PPSYVKPKPY SIMLELLESQ ANKKLTSEYT QDIVKTLSHL EALSSVNPSM IDLQPEIQWF MRPFLLDFLI ELHSSFKLQP QTLFLCLNII DRYCAKRIVF KRHYQLVGCT ALWIAGKYED KKSRVPTLKE LTIMCRNAYD EEMFIQMEMH ILSTLEWSFS HPTLEDCLQL AITHSKISTH ATPCKYNKLQ SSSSSNSANT TTSAVTAVAR FFCELSLYDK YFLSVPTSLV SITANLLACS MLQIPNASDS LKELMRKVLA KRDEFDEESN QHEIENRQPE VHGAFLSGLD DNAIAVIKRT ALMFIIQLSK VTEVLSKKYE NLGVIQVINN FHSRFTFIIQ SIYENQETII SQEPIDAKLE SLAEVLLQFP KMEDDLEDLK PPQSPHIFNN PVALTPVTPP SASSQYSVFS NRRHNSSSTC VTPIHASISA NNSKTEFSPL TATASRENNW SSPIMHV
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