| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33333 |
|---|
| Symbol | |
|---|
| ID | 4840520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | + |
|---|
| Start bp | 358237 |
|---|
| End bp | 359199 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640391835 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386083 |
|---|
| Protein GI | 150866466 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.281696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA AGGTTCCGGA TCTCTCTGAT CTCGAAACAC GGCTATCGGC GTCAATAGTA
GGACAGCCTC AGGCTGTCAA AAAAGTTTCA GAATGTCTTC GAAGAAGTCT TGCTCAATCG
TCGAGCCGCC ATTTCAGATC AATGCTTGTT CTTGTTGGCT CTCCCGGATC CGGAAAATCT
GAATTGGTAA GAAGATTGGC CGAGTATCTT TATGGGAGCG AAAAGGCTGT AATCCGTTTA
CCCCGGGAAA TTTCAGTATC TAGCCTATTG GGGTCTTCTA TAGATGGTGA AGGTATCCAG
GAGGGACTAT TGGTGACGGC ACTATTGGCG AATCCGACTT GTGTAATCTT GGTTGAGGAG
GCCGAGAATG TTCCACCCGA GACGTTGGCC TTATTACTGA GAATTGTAGC CACTGGTTCT
ATTACTTCGT CTAGAGGACG AGTTGTTCCT TGTACACATA CGGTAGTTGT TTTAAAGAGC
AGATTGGCGC AGCCAAAATT GCTAACAGAA GAAGAGATCC TTGATAGAGT GTCAAATCAC
CTAAAAACTC ACTTCGAAGA CCTTGACGAC GACTTAACCT CCACAATAGT TTTCAATCCT
CTTGGCCCGA AATCCATTTA TGACATTATC AGTCTTCAAT TAGGGCAGGT GCAAGACAGA
TTTGCTAGAT TCGGCTATGG TAAGTCCATA AGCTTTGAAC TTGACGATAA TGCTCTTAAG
TTTCTATATG AAAACGGCTA TTCTCCAACT TTGGGTGCAA AAGAGCTCGA GCGAGTGTTG
CAGGCAGAAC TCCTAAGCAG AGTCGCTATA TACTTATTAA CTGGACAAGT GAGAGACCAG
GAGACGGCCA GAGTGACATC AGGAAAGAGT GGCTTGCAAG TATTCCCAAA CCATGAGCCC
ATAGAAGTTG TCACCGTCGA CAGTGAAGAA GAATGGGATG AGACCTACTA CGAAGATTTC
TAG
|
|---|
| Protein sequence | MKYKVPDLSD LETRLSASIV GQPQAVKKVS ECLRRSLAQS SSRHFRSMLV LVGSPGSGKS
ELVRRLAEYL YGSEKAVIRL PREISVSSLL GSSIDGEGIQ EGLLVTALLA NPTCVILVEE
AENVPPETLA LLSRIVATGS ITSSRGRVVP CTHTVVVLKS RLAQPKLLTE EEILDRVSNH
LKTHFEDLDD DLTSTIVFNP LGPKSIYDII SLQLGQVQDR FARFGYGKSI SFELDDNALK
FLYENGYSPT LGAKELERVL QAELLSRVAI YLLTGQVRDQ ETARVTSGKS GLQVFPNHEP
IEVVTVDSEE EWDETYYEDF
|
|---|
| |