| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33215 |
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| Symbol | |
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| ID | 4840422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 12367 |
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| End bp | 18837 |
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| Gene Length | 6471 bp |
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| Protein Length | 2156 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640391737 |
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| Product | hypothetical serine rich protein |
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| Protein accession | XP_001386217 |
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| Protein GI | 150866573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.963879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTCC GCAAGTTCAT AACGGCAGTA GTTTTGCTGT TGGCTGGCCT AGTAACCCCT
GCTACTATCT CGGAAAGCAC AATCTATAGA GGAGAATTTG ATTTCACTAT TCTTGGACCT
CTTACTATAG ATGGCACAGG TGGTACTTAT CTTTCCATTG TTGATGTGAG TCTGGTTAGC
TTAGGTAGTC TCACTGTGGA CTCTGCTAAC CTGTTTTATG TAACAGTTGT GAATGCTCTA
AGCTCAATTG TTAATATATC AGGGTCATTA GCTAATACTG GTACTGTTTC ATTTTTAACG
GGCGTGACCT ATACTCTTGG TTCCATCACA AACAACGCTG GTGGGACAAT GTATTTCGCA
GGAAGTGGCT CAGGGGCTAC CATGGGAGCC ATAACAAACA GTGGTCAAAT GTGTTTCTAC
AACAGTGTCA CGTTTAGTAG TACTATTTCA GGTTCAGGTG GCTGTGTTTC TGCAAACCGA
GGTTCAACTA TTATCATTCC ATATACGACT TCTGGTCAGA CCTACTACTT AGATCTGCTC
TCAATGATCA ATGTAACTGC ACCTTCCGGT TCTGGATATG TCACTCCTAA TCCAATTCCT
ATACAAGGTT TTGGTAATCT GAATACTATT ACTATGAGCC AACTTCTGAG TACGGCACCT
TATTATTATA GTACTGCTTC TGATGGAGCT GCTGCTGGAG CTGCTGCAGG AACCTTAAGA
GTTTATTATT TAACTACTCA TTATGTAGAT TTCATAATTG GAACAGGCTA TGGCAATACC
GGCACCATTA CAAACCCGAA TTGGTCATAC TCTACGAAGC TGGGAATTAA ATTCATAGGT
ACACTAAAAT GGCCCACATC TTCATCTTGT CAATGTCAGG CTCTTCCAGT TGCACCTGGA
ATCAATCCAG CTGAGTACAC TACTACATTT ACAAGCGACG GAAGCACTGT GACTGGTGAA
GTGATTGTCA CTACCGACGA TTCGGGAAGC TGGTACACGA CTACTTCCAT TTACACAGAA
ACTGAGTACA ACACTCTTGT CATCCAGGAC GACGGAAGCA CTGTGACTGG TGAAGTGATT
GTCACTACCG ACGATTCGGG AAGCTGGTAC ACGACTACTT CCATTTACAC AGAAACTGAG
TACAACACTC TTGTCATCCA GGACGACGGA AGCACTGTGA CTGGTGAAGT GATTGTCACT
ACCGACGATT CGGGAAGCTG GTACACGACT ACTTCCATTT ACACAGAAAC TGAGTACAAC
ACTCTTGTCA TCCAGGACGA CGGAAGCACT GTGACTGGTG AAGTGATTGT CACTACCGAC
GATTCGGGAA GCTGGTACAC GACTACTTCC ATTTACACAG AAACTGAGTA CAACACTCTT
GTCATCCAGG ACGACGGAAG CACTGTGACT GGTGAAGTGA TTGTCACCAC CGACGATTCG
GGAAGCTGGT ACACGACTAC TTCCATTTAC ACAGAAACTG AGTACAACAC TCTTGTCATC
CAGGACGACG GAAGCACTGT GACTGGTGAA GTGATTGTCA CTACCGACGA TTCGGGAAGC
TGGTACACGA CTACTTCCAT TTACACAGAA ACTGAGTACA ACACTCTTGT CATCCAGGAC
GACGGAAGCA CTGTGACTGG TGAAGTGATT GTCACTACCG ACGATTCGGG AAGCTGGTAC
ACGACTACTT CCATTTACAC AGAAACTGAG TACAACACTC TTGTCATCCA GGACGACGGA
AGCACTGTGA CTGGTGAAGT GATTGTCACC ACCGACGATT CGGGAAGCTG GTACACGACT
ACTTCCATTT ACACAGAAAC TGAGTACAAC ACTCTTGTCA TCCAGGACGA CGGAAGCACT
GTGACTGGTG AAGTGATTGT CACTACCGAC GATTCGGGAA GCTGGTACAC GACTACTTCC
ATTTACACAG AAACTGAGTA CAACACTCTT GTCATCCAGG ACGACGGAAG CACTGTGACT
GGTGAAGTGA TTGTCACTAC CGACGATTCG GGAAGCTGGT ACACGACTAC TTCCATTTAC
ACAGAAACTG AGTACAACAC TCTTGTCATC CAGGACGACG GAAGCACTGT GACTGGTGAA
GTGATTGTCG CTACCGACGA TTCGGGAAGC TGGTACACGA CTACTTCCAT TTACACAGAA
ACTGAGTACA ACACTCTTGT CATCCAGGAC GACGGAAGCA CTGTGACTGG TGAAGTGATT
GTCACTACCG ACGATTCGGG AAGCTGGTAC ACGACTACTT CCATTTACAC AGAAACTGAG
TACAACACTC TTGTCATCCA GGACGACGGA AGCACTGTGA CTGGTGAAGT GATTGTCACT
ACCGACGATT CGGGAAGCTG GTACACGACT ACTTCCATTT ACACAGAAAC TGAGTACAAC
ACTCTTGTCA TCCAGGACGA CGGAAGCACT GTGACTGGTG AAGTGATTGT CACTACCGAC
GATTCGGGAA GCTGGTACAC GACTACTTCC ATTTACACAG AAACTGAGTA CAACACTCTT
GTCATCCAGG ACGACGGAAG CACTGTGACT GGTGAAGTGA TTGTCACCAC CGACGATTCG
GGAAGCTGGT ACACGACTAC TTCCATTTAC ACAGAAACTG AGTACAACAC TCTTGTCATC
CAGGACGACG GAAGCACTGT GACTGGTGAA GTGATTGTCA CTACCGACGA TTCGGGAAGC
TGGTACACGA CTACTTCCAT TTACACAGAA ACTGAGTACA ACACTCTTGT CATCCAGGAC
GACGGAAGCA CTGTGACTGG TGAAGTGATT GTCACCACCG ACGATTCGGG AAGCTGGTAC
ACGACTACTT CCATTTACAC AGAAACTGAG TACAACACTC TTGTCATCCA GGACGACGGA
AGCACTGTGA CTGGTGAAGT GATTGTCACT ACCGACGATT CGGGAAGCTG GTACACGACT
ACTTCCATTT ACACAGAAAC TGAGTACAAC ACTCTTGTCA TCCAGGACGA CGGAAGCACT
GTGACTGGTG AAGTGATTGT CACTACCGAC GATTCGGGAA GCTGGTACAC GACTACTTCC
ATTTACACAG AAACTGAGTA CAACACTCTT GTCATCCAGG ACGACGGAAG CACTGTGACT
GGTGAAGTGA TTGTCACTAC CGACGATTCG GGAAGCTGGT ACACGACTAC TTCCATTTAC
ACAGAAACTG AGTACAACAC TCTTGTCATC CAGGACGACG GAAGCACTGT GACTGGTGAA
GTGATTGTCA CTACCGACGA TTCGGGAAGC TGGTACACGA CTACTTCCAT TTACACAGAA
ACTGAGTACA ACACTCTTGT CATCCAGGAC GACGGAAGCA CTGTGACTGG TGAAGTGATT
GTCACCACCG ACGATTCGGG AAGCTGGTAC ACGACTACTT CCATTTACAC AGAAACTGAG
TACAACACTC TTGTCATCCA GGACGACGGA AGCACTGTGA CTGGTGAAGT GATTGTCACC
ACCGACGATT CGGGAAGCTG GTACACGACT ACTTCCATTT ACACAGAAAC TGAGTACAAC
ACTCTTGTCA TCCAGGACGA CGGAAGCACT GTGACTGGTG AAGTGATTGT CACTACCGAC
GATTCGGGAA GCTGGTACAC GACTACTTCC ATTTACACAG AAACTGAGTA CAACACTCTT
GTCATCCAGG ACGACGGAAG CACTGTGACT GGTGAAGTGA TTGTCACTAC CGACGATTCG
GGAAGCTGGT ACACGACTAC TTCCATTTAC ACAGAAACTG AGTACAACAC TCTTGTCATC
CAGGACGACG GAAGCACTGT GACTGGTGAA GTGATTGTCA CTACCGACGA TTCGGGAAGC
TGGTACACGA CTACTTCCAT TTACACAGAA ACTGAGTACA ACACTCTTGT CATCCAGGAC
GACGGAAGCA CTGTGACTGG TGAAGTGATT GTCACCACCG ACGATTCGGG AAGCTGGTAC
ACGACTACTT CCATTTACAC AGAAACTGAG TACAACACTC TTGTCATCCA GGACGACGGA
AGCACTGTGA CTGGTGAAGT GATTGTCACT ACCGACGATT CGGGAAGCTG GTACACGACT
ACTTCCATTT ACACAGAAAC ATCACCCACA TATACACTTC CAGTGCCACT GGGTGATGGA
TTTATGATAG AAATTAAAGA TGAAGATACA GGTTTGGACG TGTTCCTTAC TCACAATGGC
AACGTAATAA CTGTCGCAGA GCACGCCGGT TCTACATTTT ATTTGAATGT TCCTGAAGGA
CACCTTATCG TTGATGGGTT ATATGTTCAT GCTGACCATA GTGGAATTTA CTTGAGTGAG
ATTCCATTTG GAGGTTGGAG CATTTCCTCA ATTAGCAACA TCTTCATCAA GCGAGCAGAT
TTAGGTACAT TACTGATCAA CGGAACAACT ACCTTCTTCT ACTGTCCAGA TCAAAGCTCT
CCCTTGTCGC TTACTAATAC CATAGGTTGT GAAGAAGTTG AGCTACTAAT AGACGGTATT
GAACCACTGC AATCTTCTTC GTCTGAGTTG AGCTCTACAA TCAGCACTTC GATTGAATCA
TCATCCAGCC TATCCACTAC GGAATCCGTC ACTTCAAAGA GTTCAGAAGT TAGTGCAAGC
TCCGTATCTG AATCGAGCAT TGCATCTGCG GTAAGCTCTC CGACTACTTC TGTGTCCGAA
GTTAGTTCAA GCTCCGAATC ATCATCCAGC ATATCCAGTA CGGAATCCGT CACATCAGAG
AGTTCAGAAG TTAGTTCAAG CTCCGTATCT GAATCGAGCA TTGCATCTGC GGTAAGCTCT
TCGGCTATTT CCGTGTCCGA AGTTAGTTCA AGCTCCGAAT CATCATCCAG CATATCCAGT
ACGGAATCCG TCACATCAGA GAGTTCAGAA GTTAGTTCAA GCTCCGTATC TGAATCAAGC
ATTGCATCTG CGGTAAGCTC TCCGACTACT TCTGTGTCCG AAGTTAGTTC AAGCTCCGAA
TCATCATCCA GCATATCCAG TACGGAATCC GTCACATCAG AGAGTTCAGA AGTTAGTTCA
AGCTCCGTAT CTGAATCAAG CATTGCATCT GCGGTAAGCT CTCCGACTAC TTCTGTGTCC
GAAGTTAGTT CAAGCTCCGT ATCTGAATCA AGCATTGCAT CTGCGGTAAA CTCTCCGACT
ACTTCTGTGT CCGAAGTTAG TTCAAGCTCC GTATCTGAAT CGAGCATTGC ATCTGCGGTA
AGCTCTTCGG CTATTTCCGT GTCCGAAGTT AGTTCAATCT CCAAATCTGA ATCAGGTATC
TCGGCCATCG TCAGTTCAAG TACATTACCT CAGAAATACT CCTCAGAAAG CATTGTCGTA
TCTTCTATGA GCTCTTTATC TTTCGGATAT TACAGCAATA CTTCGTCATC ATTTTTCTCG
ATTTCCGAGA CCACTTATAC CTTATCTTCA ACATCGTCAG TTATAACAAT TACATCATCG
TCATTACCAA GTTCTTCGGA ATCAGCATTT TTGGCTTCAG TTTCTGCTAC TTCCCCAAGT
GAAATTATTA CACCTTCTTT ATTGAGTTCG CTTCCTACTT CTCAAAGTGA ACTACCATCT
ACAAGTTCAT CACCTGTTGT GGAAGAGAAC GACTTTAGAT TGCTTGCATT CTCAATCAAC
CCAGATATTG ATTTTGAACA ATTCCTTACA CATGATGGCC AATTCATCAC CTTTACCAAT
ACTGGAGGTG ATACATTCCA TTTATCTCTT CCACCTGGAT ACCTTACTGT TGGTGGACTC
TATGTTACTG CAGATAGTAA TGGGTTTCAC TTAAGTAATG AACCGTTTGC CAATTGGCAA
GAGACTAGTT CTCCTGCTGC TTTGGTCAAG AGAGAAGATG GTGATTCACT CCTGTTGAAT
GGTCAAGATG TTTTCTACGC ATGCCCAGAT ACTGCACCTG CTTTAGAACT TGTCAACAGC
AGTGGATGCA TTCCAGTAAG TTTGAAAGTT GTAGAAGAAA GTCCATCCTC TGGCACTACT
TCAACTTCTG AAACGGAAAC AGGCACAAGT ACTTCTGAAA CTAGTGGCTC TAGTTCTTGT
TCTGGTTCTG GTTCTGGTTC TGGTTCTGGT TCTGGTTCTG GTTCAGGTTC TGGTTCTGGT
TCAGGTTCAG GTTCTGGTTC AGGTTCTGGT TCTGGTTCAG GTTCAGGTTC TGGTTCAGGT
TCTGGTTCAG GTTCTGGTTC AGGTTCTGGT TCAGGTTCTG GTTCAGGTTC TGGTTCTGGT
TCAGGTTCAG GTTCTGGTTC AGGTTCTGGT TCAGGTTCTG GTTCTGATTC CGGGCATGAA
GGACCTATTG CTTCTACTCC TGTAATCACA ATACCAGGGA CTACTTTGGC AACCTCCACA
ACTTCGTATG CCCCTTCTAT TCCAACCGTT TTTGCTGCTG TTGGAGGAGC GATCAGGATT
CACCTATCTC CAATTACTTT TATCTTGTTG ATGCTTCTCC ACATTGTCTA A
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| Protein sequence | MLFRKFITAV VLSLAGLVTP ATISESTIYR GEFDFTILGP LTIDGTGGTY LSIVDVSSVS
LGSLTVDSAN SFYVTVVNAL SSIVNISGSL ANTGTVSFLT GVTYTLGSIT NNAGGTMYFA
GSGSGATMGA ITNSGQMCFY NSVTFSSTIS GSGGCVSANR GSTIIIPYTT SGQTYYLDSL
SMINVTAPSG SGYVTPNPIP IQGFGNSNTI TMSQLSSTAP YYYSTASDGA AAGAAAGTLR
VYYLTTHYVD FIIGTGYGNT GTITNPNWSY STKSGIKFIG TLKWPTSSSC QCQALPVAPG
INPAEYTTTF TSDGSTVTGE VIVTTDDSGS WYTTTSIYTE TEYNTLVIQD DGSTVTGEVI
VTTDDSGSWY TTTSIYTETE YNTLVIQDDG STVTGEVIVT TDDSGSWYTT TSIYTETEYN
TLVIQDDGST VTGEVIVTTD DSGSWYTTTS IYTETEYNTL VIQDDGSTVT GEVIVTTDDS
GSWYTTTSIY TETEYNTLVI QDDGSTVTGE VIVTTDDSGS WYTTTSIYTE TEYNTLVIQD
DGSTVTGEVI VTTDDSGSWY TTTSIYTETE YNTLVIQDDG STVTGEVIVT TDDSGSWYTT
TSIYTETEYN TLVIQDDGST VTGEVIVTTD DSGSWYTTTS IYTETEYNTL VIQDDGSTVT
GEVIVTTDDS GSWYTTTSIY TETEYNTLVI QDDGSTVTGE VIVATDDSGS WYTTTSIYTE
TEYNTLVIQD DGSTVTGEVI VTTDDSGSWY TTTSIYTETE YNTLVIQDDG STVTGEVIVT
TDDSGSWYTT TSIYTETEYN TLVIQDDGST VTGEVIVTTD DSGSWYTTTS IYTETEYNTL
VIQDDGSTVT GEVIVTTDDS GSWYTTTSIY TETEYNTLVI QDDGSTVTGE VIVTTDDSGS
WYTTTSIYTE TEYNTLVIQD DGSTVTGEVI VTTDDSGSWY TTTSIYTETE YNTLVIQDDG
STVTGEVIVT TDDSGSWYTT TSIYTETEYN TLVIQDDGST VTGEVIVTTD DSGSWYTTTS
IYTETEYNTL VIQDDGSTVT GEVIVTTDDS GSWYTTTSIY TETEYNTLVI QDDGSTVTGE
VIVTTDDSGS WYTTTSIYTE TEYNTLVIQD DGSTVTGEVI VTTDDSGSWY TTTSIYTETE
YNTLVIQDDG STVTGEVIVT TDDSGSWYTT TSIYTETEYN TLVIQDDGST VTGEVIVTTD
DSGSWYTTTS IYTETEYNTL VIQDDGSTVT GEVIVTTDDS GSWYTTTSIY TETEYNTLVI
QDDGSTVTGE VIVTTDDSGS WYTTTSIYTE TEYNTLVIQD DGSTVTGEVI VTTDDSGSWY
TTTSIYTETE YNTLVIQDDG STVTGEVIVT TDDSGSWYTT TSIYTETSPT YTLPVPSGDG
FMIEIKDEDT GLDVFLTHNG NVITVAEHAG STFYLNVPEG HLIVDGLYVH ADHSGIYLSE
IPFGGWSISS ISNIFIKRAD LGTLSINGTT TFFYCPDQSS PLSLTNTIGC EEVELLIDGI
EPSQSSSSEL SSTISTSIES SSSLSTTESV TSKSSEVSAS SVSESSIASA VSSPTTSVSE
VSSSSESSSS ISSTESVTSE SSEVSSSSVS ESSIASAVSS SAISVSEVSS SSESSSSISS
TESVTSESSE VSSSSVSESS IASAVSSPTT SVSEVSSSSE SSSSISSTES VTSESSEVSS
SSVSESSIAS AVSSPTTSVS EVSSSSVSES SIASAVNSPT TSVSEVSSSS VSESSIASAV
SSSAISVSEV SSISKSESGI SAIVSSSTLP QKYSSESIVV SSMSSLSFGY YSNTSSSFFS
ISETTYTLSS TSSVITITSS SLPSSSESAF LASVSATSPS EIITPSLLSS LPTSQSELPS
TSSSPVVEEN DFRLLAFSIN PDIDFEQFLT HDGQFITFTN TGGDTFHLSL PPGYLTVGGL
YVTADSNGFH LSNEPFANWQ ETSSPAALVK REDGDSLSLN GQDVFYACPD TAPALELVNS
SGCIPVSLKV VEESPSSGTT STSETETGTS TSETSGSSSC SGSGSGSGSG SGSGSGSGSG
SGSGSGSGSG SGSGSGSGSG SGSGSGSGSG SGSGSGSGSG SGSGSGSGSG SGSGSDSGHE
GPIASTPVIT IPGTTLATST TSYAPSIPTV FAAVGGAIRI HLSPITFILL MLLHIV
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