| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90609 |
|---|
| Symbol | URA6 |
|---|
| ID | 4840017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 572123 |
|---|
| End bp | 573089 |
|---|
| Gene Length | 967 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640391332 |
|---|
| Product | Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) |
|---|
| Protein accession | XP_001385802 |
|---|
| Protein GI | 150866264 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0563] Adenylate kinase and related kinases |
|---|
| TIGRFAM ID | [TIGR01359] UMP-CMP kinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.66653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.342317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AAACGTCTAA CATATTCAAT TCACAGTATC AACAACCATG TTTGTCAGAT CGTCGAGATT
ATTGGGAAGA AAATCGTCTC CACAATTCAC GAGATTTTCA ACCAAATCCA GAGGTCCATC
TCTGGCTATC CGTTTCAACT CGACCAAATC CACGTCTACA CCACCACCTC CGCCACCTCC
ACCACCTCAG ACTGGTTCCA AGGGCAAAAT ATTGTTGGCT ATCGGAGCCT TGGCTATTGG
TTCGACTATT GCTGCCTCCT TGTACAACAA AGATTCTCCT AAATCGGCTG TAGAACCTGT
GGCCCAAAAG GGCCCAGCCT TTCAAGATGG AAAAATCAAG GTTATCTTCG TTTTGGGGGG
ACCAGGCTCA GGTAAGGGTA CCCAGAGTGC TTTGCTCGTG AAAGAGCATG GATTTGTTCA
CTTGTCTGCT GGTGATTTGT TGAGAGAAGA ACAAAAGAGA GAGGGTTCCA AGTACGGTGA
ATTGATCGCA AACTACATTA AGGAAGGACT CATTGTACCA CAGGAAGTCA CCGTGGCTTT
GTTGGAACAG GCCATTAAGG AATCGTACGC CAAAGGTCTG ACCAAGTTCT TGATCGACGG
ATTCCCAAGA AAGATGGACC AGGCTCTCAC TTTCGAAAAC CAGATCGCCA AGTCGTCTTT
CACTTTGTTC TTTGAATGTC CCGAACAGGT CATGTTGAAG AGATTGTTGG AAAGAGGTAA
AACCAGTGGC AGAACTGACG ACAATATCGA GTCCATCACC AAGAGATTCA GAACTTTCAT
TGAAACATCC ATGCCTGTTG TTAACCACTT TGAGGAGCAA GGCAAGGTCA TCAAGGTACA
ATGCGACCAA CCAGTTGATG TCGTATACAC TCAGGTCAAG AATGCCTTGT CGGAAAAGGG
CGTTAACTAG AACATTAGAC TAGAGTATTC ATAAAGATTA TAATGTATAT ATGGCCACGG
CCTAAAC
|
|---|
| Protein sequence | MFVRSSRLLG RKSSPQFTRF STKSRGPSSA IRFNSTKSTS TPPPPPPPPP QTGSKGKILL
AIGALAIGST IAASLYNKDS PKSAVEPVAQ KGPAFQDGKI KVIFVLGGPG SGKGTQSALL
VKEHGFVHLS AGDLLREEQK REGSKYGELI ANYIKEGLIV PQEVTVALLE QAIKESYAKG
STKFLIDGFP RKMDQALTFE NQIAKSSFTL FFECPEQVML KRLLERGKTS GRTDDNIESI
TKRFRTFIET SMPVVNHFEE QGKVIKVQCD QPVDVVYTQV KNALSEKGVN
|
|---|
| |