| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90176 |
|---|
| Symbol | ETF3 |
|---|
| ID | 4840125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 312001 |
|---|
| End bp | 315291 |
|---|
| Gene Length | 3291 bp |
|---|
| Protein Length | 1048 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640391440 |
|---|
| Product | translation elongation factor |
|---|
| Protein accession | XP_001385747 |
|---|
| Protein GI | 126138448 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.902447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.536047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTCTTTTCTT TCCTCCTCAC CATATTGGAA ATGTCCGCCG CCAGTGAATC CAAATACTCC
ACCGAGGTGC TTTCCGAGTT ATTAGCCAAA TTACAGGTGG CTGATAACAA GGATGATGCT
GCTGCTTCAC TCTCGTCCTT CTTGAACTCA TCCATCGTTG AGCACGATGC TCCTGTTGAG
TTCTTCCAGG ACTTGAAGAA GCAAATCTCC AACAAGGCCA CTGCCATTGG TGCCTTGCAA
GCTTACAGAC ACATTGCCTC TGCCAACGCT TTGTCTCCAT CCATTGAGCC ATATGTTGTT
GAGTTGGTTG CTGACGTTGC TGCTAAGGCT GGTGACAAGG ACAAGGATGT TCAAACTGCT
GCCTCCGACG CCTTGTTGGC CATTTCCACT GCCATCACCC CAACCGCCAT CAAGGTCCTC
TTGCCAAAGT TGTTGGAATC TTTGACTACC ACCAACAAGT GGACCGAAAA GGTTGCCGTC
TTGAGATCGA TCACTCAATT GGTTGACACT GCCAAGGACC AGATTGCCTT GAGAATGCCT
GAATTGATCC CTGTCTTGTC CGAATCCATG TGGGATACCA AGAAGGAAGT CAAGGAAGCC
TCCACTGCTA CCATGACCAA GTCTACTGAA ACCATCGACA ACAAGGATAT CGAAAAGTTT
ATCCCTAAGT TGATTGAATG TATTGCTAAG CCAACCGAAG TTCCAGAAAC CGTTCACTTA
TTGGGTGCCA CCACCTTCGT TTCCGAAGTC ACCATGGCCA CTTTGTCCAT CATGGTCCCA
TTGTTGTCCA GAGGTTTGGC TGAACGTGAC ACTGCCATCA AGAGAAAGGC TGCTGTCATT
GTCGACAACA TGTGTAAGTT GGTCGAAGAC CCACAAGTTG TAGCTCCTTT CTTGGACAAA
TTGTTGCCAG GCTTGAAGGC TAACTTCCAA ACCATGGCTG ATCCAGAAGC CCGTGACGTT
ACCCAAAGAG CCTTGAACAC CTTGAAGAGA GTTGGTACCG TTGGTGAGGA CGATGTTATC
CCAGAAGTCT CTACTGCTGG TGACATTCCA GTTACCTTGG GTGAATTCGA AAAGTTGTTG
GAAGGAAAGA ACATCAACAA GAGATTCGAC GTTGTCAAGA CCTACATTGC TGCTATTGCC
GGTGACTTGA TCGACGAAAG AGAAATCCAG CCTGAAGCTT GGTTGCACAA CATCTTGCCA
TTTGCTACCA TCTTCTTGCA CGAAGCTGAA TCCAAGGACA TCATTGAAGA ATTCAGAAAG
AGAGCCCTTG ACAACATCCC ACAACCTCCT GCCTTCGAAG ACGAAGAAGA TGAAGGTGAA
GACTTGTGTA ACTGTGAGTT CTCGTTGGCC TACGGTGCTA AGATCTTGTT GAACAAGACT
CAATTGAGAT TGAAGAGAAA CAGAAGATAC GGTTTGTGTG GTCCTAACGG TGCTGGTAAG
TCCACCTTGA TGAGAGCCAT TGCCAACGGT CAAGTTGAAG GTTTCCCAAC CCAAGATGAA
TGTAAGACTG TCTACGTCGA ACACGACATT GATGGTACTC ACGCCGACAC TACTGTCACT
GAATTCGTCA TCCAAGATGG TGAAGTTGGT TTGACTGAAG AAGTCGTCAC CGAAAAGTTG
ATTGAATTCG GTTTCTCCGA TGCCATGACC AAGATGCCTA TTCAATCTTT GTCTGGTGGT
TGGAAGATGA AGTTGGCCTT GGCCAGAGCT GTCTTGAAGA ACGCTGACAT CTTGTTGTTG
GATGAACCAA CTAACCATTT GGACACTGTC AACGTCGCTT GGTTGGTCAA CTACTTGGAA
ACCTGTGGTA TCACTTCCAT CATTGTTTCC CACGACTCCG GTTTCTTGGA CAACGTCTGT
GAATACATTA TCCACTACGA AGGTTTCAAG TTGAGAAAGT ACAAGGGTAA CTTATCTGAA
TTCGTCAAGA AGTGTCCTTC TGCTCAATCT TACTACGAGT TGGGTGCCTC TGACTTGGAA
TTCAGATTCC CAGAACCAGG TTTCTTGGAA GGTGTCAAGA CCAAGCAAAA GGCCATTGTT
AAGGTGTCTT CCATGTCTTT CCAATACCCA GGTACCACTA AGCCACAAAT CCAAGACATT
AACTTCCAAT GTTCTTTGTC TTCCAGAATT GCTGTCATTG GTCCAAACGG TGCTGGTAAG
TCTACCTTGA TTAACGTCTT GACTGGTGAA TTATTGCCAA CTACTGGTGA AGTTTACGTC
CACGAAAACT GTCGTATCGC TTACATTAAG CAACACGCTT TCGCTCACAT TGATAACCAC
TTGGACAAAA CCCCATCTGA ATATATCCAA TGGAGATTCC AAACTGGTGA AGACAGAGAA
ACCATGGACA GAGCTTCCAG ACAAATCTCT GAATCCGACG AGCAAAACAT GAACAAGATC
TTCAAGGTCG AAGGTACCCC AAGAAGAATT GCTGGTATTC ATGCTAGAAG AAAGTTCAAG
AACTCTTACG AATACGAAAT CTCCTGGAAC TTGGGTGAAA ACGTTGGTAT GAAGAACGAA
AGATGGGTCC CAATGATGTC TGTTGACAAC ACCTGGTTGC CAAGAGGTGA ATTGATGGAA
ACCCACTCCA AGTTGGTCGC TGAAGTCGAT ATGAAGGAAG CCTTGGCTTC CGGTCAATTC
AGACCTTTGA CCAGAAAGGA AATCGAAGAA CACTGTGCCA TGTTGGGTCT TGAAACCGAA
TTGGTTTCTC ACTCCAGAAT CAGAGGTTTG TCTGGTGGTC AAAAGGTCAA GTTGGTCTTG
GCTGCTTGTA CCTGGCAAAG ACCTCATTTG ATCGTCTTGG ATGAACCAAC CAACTACTTG
GACCGTGACT CTTTGGGTGC TTTGTCCAAG GCCTTGAAGG CTTTCGAAGG TGGTATTGTT
ATCATTACCC ACTCTGCTGA ATTCACCAAG GACTTGACTG AAGAAGTCTG GGCTGTTTTG
GACGGTAGAA TGACTCCATC CGGTCACAAC TGGGTCCAAG GTCAAGGTGC TGGTCCAAGA
TTGGAAAACA AGGAAGATGA TGAAGAAGAC AAATTCGATG CTATGGGTAA CAAGGTTGCC
GGTGCTAAGA AGAAGAAGAA GTTGTCTTCT GCTGAGTTGA GAAAGAAGAA GAAGGAAAGA
ATGAAGAAGA AGAAGGAATT GGGTGATGCC TACGTTTCTT CTGACGAAGA ATTCTAAGCT
ATTATTGTAG CCCAACCTCA TTCATATTTC TTCCTTTTTT GTCTATATAA TAATTGTTTA
TTTCTATACT CATAATATTA TAGATTGATT TATAAAATAT AAGAACTCTA T
|
|---|
| Protein sequence | MSAASESKYS TEVLSELLAK LQVADNKDDA AASLSSFLNS SIVEHDAPVE FFQDLKKQIS
NKATAIGALQ AYRHIASANA LSPSIEPYVV ELVADVAAKA GDKDKDVQTA ASDALLAIST
AITPTAIKVL LPKLLESLTT TNKWTEKVAV LRSITQLVDT AKDQIALRMP ELIPVLSESM
WDTKKEVKEA STATMTKSTE TIDNKDIEKF IPKLIECIAK PTEVPETVHL LGATTFVSEV
TMATLSIMVP LLSRGLAERD TAIKRKAAVI VDNMCKLVED PQVVAPFLDK LLPGLKANFQ
TMADPEARDV TQRALNTLKR VGTVGEDDVI PEVSTAGDIP VTLGEFEKLL EGKNINKRFD
VVKTYIAAIA GDLIDEREIQ PEAWLHNILP FATIFLHEAE SKDIIEEFRK RALDNIPQPP
AFEDEEDEGE DLCNCEFSLA YGAKILLNKT QLRLKRNRRY GLCGPNGAGK STLMRAIANG
QVEGFPTQDE CKTVYVEHDI DGTHADTTVT EFVIQDGEVG LTEEVVTEKL IEFGFSDAMT
KMPIQSLSGG WKMKLALARA VLKNADILLL DEPTNHLDTV NVAWLVNYLE TCGITSIIVS
HDSGFLDNVC EYIIHYEGFK LRKYKGNLSE FVKKCPSAQS YYELGASDLE FRFPEPGFLE
GVKTKQKAIV KVSSMSFQYP GTTKPQIQDI NFQCSLSSRI AVIGPNGAGK STLINVLTGE
LLPTTGEVYV HENCRIAYIK QHAFAHIDNH LDKTPSEYIQ WRFQTGEDRE TMDRASRQIS
ESDEQNMNKI FKVEGTPRRI AGIHARRKFK NSYEYEISWN LGENVGMKNE RWVPMMSVDN
TWLPRGELME THSKLVAEVD MKEALASGQF RPLTRKEIEE HCAMLGLETE LVSHSRIRGL
SGGQKVKLVL AACTWQRPHL IVLDEPTNYL DRDSLGALSK ALKAFEGGIV IITHSAEFTK
DLTEEVWAVL DGRMTPSGHN WVQGQGAGPR LENKEDDEED KFDAMGNKVA GAKKKKKLSS
AELRKKKKER MKKKKELGDA YVSSDEEF
|
|---|
| |